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Detailed information on CNT30223113


BLAST search results

BLAST vs Swiss-Prot:
sp|P84582|ATPA_POPEU, E-value = 1e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30271983Hordeum vulgareChenopodium quinoa51.6113.6890.62160forward
CNT30710758Hordeum vulgareGlycine max35.4836.7992.73110forward
CNT30353938Hordeum vulgareEragrostis tef81.6143.5594.86253forward
CNT30364459Hordeum vulgareSorghum bicolor34.1925.9293.4106forward

Expression of CNT30223113

Peptides detected in this lncRNA

>peptide 1 (34 aa)
TAPYRNHRIDSNKPCLKRFVYGTPGNYTWSRRFN*

Sequence

>CNT30223113
CTACCGCGCCCTATAGGAATCATCGAATCGATAGCAATAAGCCCTGTTTGAAGAGGTTCGTATACGGAACGCCTGGAAATTATACTTGGAGCAGGAGATT
CAATTAAGCGAGATTCGGAAGCTATAATTTCGCCTTTCCCATCAATAGGTTTAGCCAGAGCATTTACAACACGACCCAAGTAAGCCTCACTCACGGGTAT
CTGAGCAATTCTTCCTGTTGCTTTTACAAAACTGCCCTCTTGTATCATCAACCCATCGCCCATTAATACAATCCCAACATTTTTGGATTCCAAATTCAGA
GCAATACACG