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Detailed information on CNT30689283


BLAST search results

BLAST vs Swiss-Prot:
sp|P06528|ATPF_WHEAT, E-value = 5e-63

BLAST vs NONCODE:
NONZMAT000296, E-value = 1e-174

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Triticum urartuOryza sativa32.9114.7696.41835forward
CNT30678565Triticum urartuSetaria viridis12.3834.290.45314forward
CNT30521912Triticum urartuSetaria italica13.64100.5888.15346reverse complement
CNT30535895Triticum urartuEucalyptus grandis7.4133.9487.77188forward
CNT30268703Triticum urartuChenopodium quinoa9.7822.1691.94248forward
CNT30506790Triticum urartuNicotiana attenuata6.2325.9991.14158reverse complement
CNT30710758Triticum urartuGlycine max7.8466.5687.94199forward
CNT30161394Triticum urartuPistacia vera4.2249.7786.92107forward
CNT30179912Triticum urartuSecale cereale30.8645.9299.49783forward
CNT30301056Triticum urartuTriticum aestivum41.4379.2699.141051forward
CNT30222903Triticum urartuHordeum vulgare7.9670.8898.51202forward
CNT30401480Triticum urartuTriticum turgidum28.81101.3997.26731reverse complement
CNT3086153Triticum urartuVigna radiata6.776.9281.76170reverse complement
CNT30554216Triticum urartuOryza glaberrima19.0874.2396.07484forward
CNT30439866Triticum urartuAegilops tauschii9.54100.4198.35242forward
CNT30660677Triticum urartuTriticum dicoccoides20.538.9899.42520forward
CNT30598585Triticum urartuFraxinus excelsior13.6840.6885.3347forward
CNT3017917Triticum urartuZea mays36.6622.3994.41930forward
CNT30205079Triticum urartuHelianthus annuus14.7451.7383.42374forward
CNT30353938Triticum urartuEragrostis tef18.5380.993.62470forward
CNT30364459Triticum urartuSorghum bicolor16.2100.4991.24411forward
CNT30621081Triticum urartuCajanus cajan13.9133.8180.74353forward
CNT30371010Triticum urartuOryza glumipatula15.7343.6594.99399forward
CNT30409854Triticum urartuPapaver somniferum14.7456.4183.16374forward
CNT30149007Triticum urartuBrachypodium distachyon12.5797.8594.67319reverse complement
CNT30103672Triticum urartuOryza rufipogon7.7722.5781.73197forward
CNT30577762Triticum urartuOryza barthii8.6770.7490220reverse complement
CNT30604150Triticum urartuOryza punctata15.9674.7289.63405reverse complement
CNT30551824Triticum urartuOryza brachyantha9.5499.1894.63242forward

Expression of CNT30689283

Peptides detected in this lncRNA

>peptide 1 (35 aa)
SIYNTTQVSLTHGYLSNSSCCFYKTSLLYHQPIAH*

>peptide 2 (36 aa)
MPILARIVRKCNSVFKQLFRVPRAPCTACWKTRCRT*

>peptide 3 (48 aa)
MNLSIHLALTLLFFFYSYFHIFFLSNEPILYLLFYVYISIYRNLYKTR*

>peptide 4 (50 aa)
HLQHDPSKPHSRVSEQFFLLLLQNFPLVSSTHRPLIQSQHFWIPNSEQYP*

>peptide 5 (61 aa)
MVPLRNSSEFRIVLKILCFRLSNKSFNESRLFCKFTTFMISSRTKHESFDSFGSHAPFFFL*

Sequence

>CNT30689283
AGCATTTACAACACGACCCAAGTAAGCCTCACTCACGGGTATCTGAGCAATTCTTCCTGTTGCTTTTACAAAACTTCCCTCTTGTATCATCAACCCATCG
CCCATTAATACAATCCCAACATTTTTGGATTCCAAATTCAGAGCAATACCCCTAGTACCTTCTGCAAATTCGACTAATTCACCTGACATTATTTCACCAA
GACCTATAATACGAGCAATCCCATCCCCCACTTGAACTACGCGACCTATATTCTCAATCCCTACTTTCCTATTATATTGTTCAATACGTTCGCGGAGAAT
TTTATGAATTTCGTCGACTCGAAGGGTTGCCATTAGTGTTTCTTGACTCTTTTTTCGGAAGCAAGGGGAAAAATAATGCCTAAATTCTAAACGAAAGTAG
AAGTTCAAGGCCTAATTAATTTAATTATTTCTTCCATTCCAGGGACCCGAGAATGCCAATATTAGCACGAATCGTACGGAAATGTAACTCGGTATTCAAA
CAACTATTCAGAGTTCCTAGAGCTCCTTGTACGGCCTGTTGGAAAACCCGCTGTCGGACCTGATTCATTGCCCTTTGTTTTTCAAAATAAAGGGTTTCGT
TTTTAGACTTTTCCAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTGCTTTTTCTCGTTCTATCTCAGAGTATCCATTCATTCGATACTCATC
CGCTTCTAGTTCGACTTTCTGTAATCGAATCCGAGCTTTTTCGAGTTGCTCAATGGTCCCTCTACGCAATTCTTCTGAATTTCGAATAGTACTCAAGATC
CTCTGTTTTCGATTATCTAATAAATCTTTTAATGAAAGTAGATTATTTTGTAAGTTTACAACTTTTATGATCTCTTCCCGAACCAAACATGAATCTTTCG
ATTCATTTGGCTCTCACGCTCCTTTTTTTTTTCTATAGCTATTTCCATATCTTTTTTTTAAGTAATGAGCCTATCCTCTATCTTCTTTTTTATGTTTATA
TTTCAATATACCGAAACCTATATAAGACTAGATAAATATTAAGAGGACTCTTCCGCCTAGATAAAAATATATCATGGTCAGCAAAGTTGTTTCTTTATTT
TTATTTGCCCTCTAGTTAATAATTTCAATTTCATTAAGAAAAACTAACTAAATAAATGGAAAATGAAAATTAATAGAATTCTTTTTTATTTTTTTTTTCT
TCAAATCCAAAAAATTTCTCTTTTTTATACATAGGTCGTCGATTCGGCATTGGTTAAAAAAGGGCAGGGTGCCCCCTTTTTTTTCTAGTAAATAGTTCAA
ACCATTTTATCGATATGAGTGTTCTATATCAGATAAATTTTACATTAGCTATTTCCCGTTTAAATTGGTACTAATACTAATATAGTTGTAGAAAGAGTAC
CTCTTTTTGCCTGGACTTCAAGCAGTTTAGCTTTAACCGTGTTAATGGTCTCACATTCTTGGTTTATAGAGAATCAAAGTTGATTTACCAATGAGTCGCG
AAATGCTATGGTTCTTCCATATGATTTCTGAATTTATTCAGAAGTAATTCGTCGAGATCGTGCACCCTTTTCTTATTTATCCGAAAAATACTAAAAAATA
TTATAAAGTGCAGCCGGATAGATCCAATCTATTCTTGAAATAGACAACTCGCACACACTCCCTTTCCAAAAAAAATCAAAACACCAACCACTACAGTTAG
ATTTATTAGATTTGTTGCTAAAATATCGGTATTAAGCCCGAAACTGCCAGCGGATGGCCAGTGAGCTAAAAAAACGAAAGAATGGGTTACATTTTTCATA
TGCTCTCCTCTTATAGATAGGACGAACAAAGAACAAAGTTTTTCGATCACTTACTTCGCTCGCCCTTTTTTGATCGGTTTTTTTAATGCAAATAGATTCA
ATCTAGTAATTTCTTTTAGATTAAGTCTTACGTCTTGTTTGACCGGTGAAAGACTTCCTTTGTTGAAATGTTCTGTTCCCAAAATTCCTAAAATAAAAGG
AAAAAACTTTCCACTTTCCTAAACTAAGGACGGGAAATAAGAAGGTGAGCATATCTTCTAAATTAATAATACTCAACTCAGCCCTTCCTAGAATGGGGTA
TTATCTGTCCCGATAAATAGATAATTCCAGGAGTAATAAATAGGAGTAAATTAAATAAAGTATTGATATAATTGGAATTGTGGAAGCAAATACCAATTTA
CTAAAAAAAGAAAAAAGTATCTAATCGAAATCGAAAGAATTTTTTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTC
CATAAATTGTTAAAGCTTCCATAAAAGCTAGACTAAGCAATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTTG
TCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCAATAACAGAAGCAGCAGCAATTAGTGGATTCATG
GTGAGTAGTTCCTCCGTGTCAAAAAAAGAAATGGTTA