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Detailed information on CNT30660677


BLAST search results

BLAST vs Swiss-Prot:
sp|P06528|ATPF_WHEAT, E-value = 1e-111

BLAST vs NONCODE:
NONORUT001152, E-value = 9e-72

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Triticum dicoccoidesOryza sativa81.4819.2291.171087forward
CNT30535895Triticum dicoccoidesEucalyptus grandis10.3424.9185.51138forward
CNT30282912Triticum dicoccoidesChenopodium quinoa40.7850.7584.93544forward
CNT30632292Triticum dicoccoidesVigna unguiculata28.1112.580.8375forward
CNT30505351Triticum dicoccoidesNicotiana attenuata36.5114.0185.83487forward
CNT3095993Triticum dicoccoidesSolanum tuberosum28.049.3583.42374forward
CNT30179912Triticum dicoccoidesSecale cereale29.3122.9398.47391forward
CNT30291829Triticum dicoccoidesTriticum aestivum94.0831.8499.21255forward
CNT3086153Triticum dicoccoidesVigna radiata12.7476.9281.76170reverse complement
CNT30541450Triticum dicoccoidesBrassica napus36.4317.2981.89486forward
CNT30554216Triticum dicoccoidesOryza glaberrima47.7597.796.08637forward
CNT30145240Triticum dicoccoidesMedicago truncatula12.7430.5892.94170forward
CNT30598585Triticum dicoccoidesFraxinus excelsior38.8360.7385.91518forward
CNT3018020Triticum dicoccoidesZea mays71.8123.2792.69958forward
CNT30205079Triticum dicoccoidesHelianthus annuus40.8575.3884.77545forward
CNT30689283Triticum dicoccoidesTriticum urartu59.631.3498.87795forward
CNT30364459Triticum dicoccoidesSorghum bicolor10.6434.7288.73142forward
CNT30621081Triticum dicoccoidesCajanus cajan34.7844.4482.97464forward
CNT30596381Triticum dicoccoidesOryza meridionalis7.1232.3184.2195forward
CNT30409854Triticum dicoccoidesPapaver somniferum41.6883.8684.71556forward
CNT30121210Triticum dicoccoidesCitrus clementina40.8513.9985.14545forward
CNT30604201Triticum dicoccoidesOryza punctata7.548.7886100reverse complement

Expression of CNT30660677

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MPILARIVRKCNSVFKQLFRVPRAPCTACWKTRCRT*

>peptide 2 (62 aa)
MVPLRNSSEFRIVLKILCFRLSNKSFNTPFPKKIKTPTTTVRFIRFVAKISVLSPKLPADGQ*

Sequence

>CNT30660677
GTCGACTCGAAGGGTTGCCATTAGTGTTTCTTGACTCTTTTTTCGGAAGCAAGGGGAAAAATAATGCCTAAATTCTAAACAAAAGTAGAAGTTCAAGGCC
TAATTAATTTAATTATCTCTTCCATTCCAGGGACCCGAGAATGCCAATATTAGCACGAATCGTACGGAAATGTAACTCGGTATTCAAACAACTATTCAGA
GTTCCTAGAGCTCCTTGTACGGCCTGTTGGAAAACCCGCTGTCGGACCTGATTCATTGCCCTTTGTTTTTCAAAATAAAGGGTTTCGTTTTTAGACTTTT
CCAATTGTTCCAAACTAATAGAAGTAGCATTAATCAAATTTGCTTTTTCTCGTTCTATCTCAGAGTATCCATTCATTCGATACTCATCCGCTTCTAGTTC
GACTTTCTGTAATCGAATCTGAGCTTTTTCGAGTTGCTCAATGGTCCCTCTACGCAATTCTTCTGAATTTCGAATAGTACTCAAGATCCTCTGTTTTCGA
TTATCTAATAAATCTTTTAACACTCCCTTTCCAAAAAAAATTAAAACACCAACCACTACAGTTAGATTTATTAGATTTGTTGCTAAAATATCGGTATTAA
GCCCGAAACTGCCAGCGGATGGCCAGTGAGCTAAAAAAACGAAAGAATGGATTACATTTTTCATATGCTCTCCTCTTATAGATAGGACGAACAAAGAACG
AAGTTTTTCGATCACTTACTTCGCTCGCCCTTTTTTGATCGGTTTTTTAATGCAAATAGATTCAATCTAGTAATTTCTTTTAGATTAAGTCTTACGTCTT
GTTTGATCGGTGAAAGACTTCCTTTGTTGAAATGTTCTGTTCCCACAATTCCTAAAATAAAAGGAAAAAACTTTCCACTTTCCTAAACTAAGGACGGGAA
ATAAGAAGGTGAGCATATCTTCTAAATTAATAATACTCAACTCAGCCCTTCCTAGAATGGGGTATTATCTGTCCCGATAAATAGATAATTCCAGGAGTAA
TAAATAGGAGTAAATTAAATAAAGTATTGATATAATTGGAATTGCGGAAGCAAATACCAATTTACTAAAAAAAGAAAAAAGTATCTAATCGAAATCGAAA
GAATTTTTTTTAAGATTAAACAAAAGGGTTCGCAAATAAAAGCGCTAGTGCCACAACTAGTCCATAAATTGTTAAAGCTTCCATAAAAGCTAGACTAAGC
AATAAAGTACCTCGTATTTTACCTTCTGCTTCTGGCTGTCTCGCAATACCTTCTACAGCTTGTCCTGCAGCAGTACCTTGACCAACTCCAGGTCCAATAG
AAGCAATCCCTACGGCCAATCCAGCAGCAATAAC