Detailed information on CNT30710758


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9BBS3|ATPA_LOTJA, E-value = 2e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Glycine maxOryza sativa66.563.5286.43199forward
CNT30703171Glycine maxQuercus lobata66.891.6892.5200forward
CNT30271983Glycine maxChenopodium quinoa66.8917.0990200forward
CNT30201764Glycine maxPisum sativum47.4918.9192.96142forward
CNT3095993Glycine maxSolanum tuberosum66.89589.5200forward
CNT30301052Glycine maxTriticum aestivum66.568.0587.44199forward
CNT30223113Glycine maxHordeum vulgare36.7935.4892.73110forward
CNT30541468Glycine maxBrassica napus66.895.8489.5200forward
CNT3017917Glycine maxZea mays60.874.3887.91182forward
CNT30689283Glycine maxTriticum urartu66.567.8487.94199forward
CNT30353938Glycine maxEragrostis tef66.5634.2586.93199forward
CNT30364459Glycine maxSorghum bicolor58.1942.5485.06174forward
CNT30371010Glycine maxOryza glumipatula66.5621.7786.43199forward
CNT30121210Glycine maxCitrus clementina66.895.1391.5200forward
CNT30103672Glycine maxOryza rufipogon31.7710.8885.2695forward

Expression of CNT30710758

Peptides detected in this lncRNA

>peptide 1 (35 aa)
TAVLPVCLSPIINSRWPRPMGIIESIAISPVWRGI*

Sequence

>CNT30710758
ACTGCTGTTTTACCCGTTTGTCTGTCTCCAATAATTAATTCTCGTTGGCCACGTCCTATGGGGATCATCGAATCAATAGCAATAAGTCCTGTTTGGAGAG
GTATCTGAGCAATTCTTCCTGTTGCTTTTACTGAACTTCCCTCTTGTATCATCAAACCATCACCCATTAATACAACACCAACATTTTTGGATTCCAAATT
CAAAGCAATGCCTATAGTACCCTCTTCAAATTCCACTAATTCACCCGCCATTACTTCATCAAGACCATAAATACGAGCAATACCGTCGCCTACTTGAAG