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Detailed information on CNT30289362


BLAST search results

BLAST vs Swiss-Prot:
sp|P58386|PSAB_WHEAT, E-value = 3e-155

BLAST vs NONCODE:
NONOSAT000261, E-value = 3e-74

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30202037Triticum aestivumPisum sativum55.619.2487.86626forward
CNT30219816Triticum aestivumHordeum vulgare49.8228.1598.22561forward
CNT3059930Triticum aestivumArabidopsis lyrata23.8980.7889.96269forward
CNT301761Triticum aestivumZea mays35.77.0996.27402forward
CNT30683954Triticum aestivumTriticum urartu58.7923.6999.85662forward
CNT30430934Triticum aestivumPapaver somniferum58.710.1290.02661forward
CNT3057356Triticum aestivumAmborella trichopoda58.8827.5687.03663forward
CNT30147977Triticum aestivumBrachypodium distachyon45.6541.9697.67514forward
CNT30585620Triticum aestivumEchinochloa crusgalli58.0812.7596.79654forward
CNT30496729Triticum aestivumDigitaria exilis58.76596.67661forward

Expression of CNT30289362

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MSRLYPLGKYRFDQDLLFWSTKSKHDVVMNIKAQGMES*

>peptide 2 (38 aa)
MSRLYPLGKYRFDQDLLFWSTKSKHDVVMNIKAQGMES*

Sequence

>CNT30289362
GCGCCCTTTACTAAAATCAATGTAGTTGTATGCAAACCTAGAGCAATAGCATGATGAACCAAGAAATCCCCAGGTCCTATTGTTAAGAAAAGCGAATTAC
TATTCTCATTAACAGCATTCAACCATCCGGGCAACCATAGGCTTCGACCCGCATTGAAAGCGGGGCCATTCGTTGAAGATAAGAGTATATCGAACCCATA
TGTCGTCTTGCCATGAGCAGATTGTATCCATTGGGCAAATATAGGTTCGATCAAGATTTGCTTTTCTGGAGTACCAAAAGCAAGCATGACGTCGTTATGA
ACATAAAGGCCCAAGGTATGGAATCCTAGAAAGAGGCTAGCCCAACTTAAATGAGATATGATAGCTTCTTTATGGTCTAACATTCTTGCCAATACATTAT
CCTCATTCTGTTCCGGATTGTAATCCCTAATGAAAAAAATAGCTCCATGAGCAAAAGCCCCTGTCATGATGAACCAAGAAATCCCCAGGTCCTATTGTTA
AGAAAAGCGAATTACTATTCTCATTAACAGCATTCAACCATCCGGGCAACCATAGGCTTCGACCCGCATTGAAAGCGGGGCCATTCGTTGAAGATAAGAG
TATATCGAACCCATATGTCGTCTTGCCATGAGCAGATTGTATCCATTGGGCAAATATAGGTTCGATCAAGATTTGCTTTTCTGGAGTACCAAAAGCAAGC
ATGACGTCGTTATGAACATAAAGGCCCAAGGTATGGAATCCTAGAAAGAGGCTAGCCCAACTTAAATGAGATATGATAGCTTCTTTATGGTCTAACATTC
TTGCCAATACATTATCCTCATTCTGTTCCGGATTGTAATCCCTAATGAAAAAAATAGCTCCATGAGCAAAAGCCCCTGTCATGATGAACCCTGCAATATA
TTGGTGATGAGTATATAAAGCAGCTTGAGTAGTAAAGTCTTGTGCTATGAATGCATAAGGAGGTAAAGAGTACATATGTTGAGCTACTAAGGAAGTAATA
ACCCCTAAAGAAGCTAGAGCAAGACCTAACTGAAAATGAATCGAATTGTTGATTGTGTCATAAAGGCCCTTATGCCCACGCCCTAATCGACCCCCCGGAG
GAGTATGCGCTTCTAAAAAATCTTTA