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Detailed information on CNT30202037


BLAST search results

BLAST vs Swiss-Prot:
sp|P58385|PSAB_LOTJA, E-value = 0.0

BLAST vs NONCODE:
NONOSAT000261, E-value = 3e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678731Pisum sativumSetaria viridis9.2887.7990.4302forward
CNT30526965Pisum sativumEucalyptus grandis2.5839.0786.984reverse complement
CNT30617597Pisum sativumSesamum indicum9.9930.1294.46325forward
CNT30289362Pisum sativumTriticum aestivum19.2455.687.86626forward
CNT30219816Pisum sativumHordeum vulgare56.9192.9387.11852forward
CNT30560220Pisum sativumActinidia chinensis19.5140.8493.86635forward
CNT3059930Pisum sativumArabidopsis lyrata8.5783.7889.96279forward
CNT30205718Pisum sativumHelianthus annuus4.7338.1293.51154forward
CNT30682212Pisum sativumTriticum urartu65.8364.99882142forward
CNT30152144Pisum sativumPrunus persica6.5299.5385.38212forward
CNT30484006Pisum sativumChara braunii6.8861.7181.25224forward
CNT3057356Pisum sativumAmborella trichopoda47.1163.7285.061533forward
CNT3024232Pisum sativumPopulus trichocarpa4.6173.1789.33150forward
CNT30147977Pisum sativumBrachypodium distachyon18.950.287.32615forward
CNT30585620Pisum sativumEchinochloa crusgalli65.8641.7788.382143forward
CNT30496729Pisum sativumDigitaria exilis30.7398.3387.31000forward

Expression of CNT30202037

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MIASLCSNILANTFIRVCSGIVISNKKDSSMSKSPVIINPAMY*

>peptide 2 (42 aa)
MSPLFQGHHKGTENQDLLYPVSIVSYEQIEHLLGVSIPSHEL*

>peptide 3 (45 aa)
MRPKQKYHKSHLVPDHRKENYNQNPFYPALTWNHVHLKHLLLRSM*

>peptide 4 (45 aa)
MRPKQKYHKYHLVPDHRKENYNQNPFYPALTWNHVHLKHPLLRSM*

>peptide 5 (37 aa)
FSFSLAIKLFFAMMIHFLLLSIIFSYSYSSKSNFSLP*

>peptide 6 (31 aa)
MIPSGYLACPPSSRAITRAPKTKICFIRYQS*

>peptide 7 (40 aa)
MSRLYPLGKYRFDQDLFLRSAKSKHDIIMDIKSQSMEPQK*

>peptide 8 (39 aa)
MPQNFLAKLHGRDSRKSTEKLLLIVRNEKQKYSDKDVPQ*

>peptide 9 (52 aa)
FLFLPGNQTFLCHDDSFLITIHNFFLFLFLEIKLFFAMMIDFLLLPMLEVGS*

>peptide 10 (29 aa)
MCSKIYFILCQYEISSIHMTTNEKKNCNS*

Sequence

>CNT30202037
TTTCTCTTTCTCCCTGGCAATCAAACTTTTCTTTGCCATGATGATTCATTTCTTATTACTATCCATAATTTTTTCCTATTCTTATTCCTCGAAATCAAAC
TTTTCTTTGCCATGATGATTGATTTCCTATTACTACCAATGCTAGAAGTCGGATCCTAGATGTAGAAATAGAAGAATTCTTCATACAAAGAGATTAAATT
TTTGCAGATACAATAACGAATCAAATTAACCAAATTTACCTGATGTAGAGGCAATCAAGAAAGCCGCATAAGTAAATATATAACCTACCGAAAAGTGGAC
TAATCCAACCAATCTTGCTTGGACAATCGAAAGAGCCACAGGTTTATCTCTCCATCGAATCAAATTCGCCAAAGGTGTGCGTTCATGAGCCCATGCTAAA
GTTTCAATCAATTCCTGCCAATATCCGCGCCATGAGATTAAGAACATAAATCCAGTAGCCCAAACAAGATGTCTAAATAAGAACATCCACGCCCAGACTG
ATAAACTATTCATACCAAAGGGGTTATACCCATTGATAAGTTGTGAAGAATTTAACCATAGATAATCTCTTAACCATCCCATCAAATAGGTTGAAGATTC
ATAAAATTGTGAAACATTACCCTGCCATAATGTAATGTGCTTCCAATGCCAATAAAAAGTAACCCATCCAATGGTATTTAACATCCAGAAAACTGCCAAA
TAAAATGCGTCCCAAGCAGAAATATCACAAGTCCCACCTCGTCCCGGACCATCGCAAGGAAAACTATAACCAAAATCCTTTTTATCCGGCATTAACTTGG
AACCACGTGCATCTAAAGCACCTTTTACTAAGATCAATGTAGTTGTATGTAAACCAAGAGTCCAAATAAAATGCGTCCCAAGCAGAAATATCACAAGTAC
CACCTCGTCCCGGACCATCGCAAGGAAAACTATAACCAAAATCCTTTTTATCCGGCATTAACTTGGAACCACGTGCATCTAAAGCACCCTTTACTAAGAT
CAATGTAGTTGTATGTAAACCAAGAGCAATAGCATGATGAACCAAGAAGTCTCCAGGCCCTATTGTTAAGAATAGAGAATTACTATTCTCATTAATAGCA
TTTAACCAACCCGGCAACCGTATGCTTCGCCCCGCATTCAGCGCCGGACTATTCGTTGAAGATAAAAGTACATCGAAACCATATGAAGTTTTACCATGAG
CAGATTGTATCCATTGGGCAAATATAGGTTCGATCAAGATTTGTTTCTCAGGAGTGCCAAAAGCAAGCATGACATCATTATGGACATAAAGTCCCAAAGT
ATGGAACCCCAGAAATAGGCTGGCCCAACTTAAATGGGATATGATAGCTTCTTTGTGCTCTAACATTCTTGCCAATACATTTATCCGCGTCTGTTCGGGG
ATTGTAATCTCGAATAAAAAAGATAGCTCCATGAGCAAAAGCCCTGTCATAATAAATCCTGCAATGTATTGATGATGAGTATATAACGCAGCTTGAGTAG
TAAAGTCTTGTGCTATAAACGCATAAGCAGGTAACGAATACATGTGTTGAGCTACCAAAGAAGTAATGACCCCTAACGAGGCTAGAGCAAGGCCTAATTG
AAAATGAATTGAATTATTGATTGTGTCATAAAGACCCTTATGTCCACGCCCCAATCTCCCCCCGAGGAATATGTGCTCTAAAATATATTTTATACTGTGC
CAATACGAAATTAGTTCTATACATATGACCACCAATGAGAAAAAGAATTGCAATAGCTAAATGATGATGGGCCATATCGGTAAGCCATAAACTTTGCGTT
TGAGGATGGAATCCCCGAGAAGTGTTAGAATGGCAGTTCCCGCGCCTTGCGAAGTACTAAATAAATGATTACTAGAATCGGGGTTTTGAGCATAAAGATT
CCACTGACCTGTAAAAAGTGGCCCTAATCCTTGAGGGTGAGGCAATACACTTAAGAAATTATTCCATCGAACATATTCTCCTCTGGATCCTGGAATAGCC
ACATGGACTAAATGCCCTGCCAAGCTAAGGAACTGACTCCAAATAGTCCTGACAAATGATGATTGAGGCGGGATTCGGCATTTTTAAACCAGGAAACGCT
CGGTTTCCATTTCGGTTGTAGGTGTAACCAGCCCGCTAATAAGGATATGAAAGAAAGAAATAATAGAAAAATAGCTCCAGTATAAAGATCCTCATTAGTA
CGTAAACCAATTGTATACCACCACTGATAAACACCGGAATAGGCAATATTCACTGGGCCAAGAGCACCCCCTCGAGTAAAAGCTTCTACAGCCGGTTGAC
CAAAATGGGGATCCAAATTGCATGAGCAATAGGTCTTACATGTAAAGGATCCTGTACCCATGCCTCAAAATTTCCTTGCCAAGCTACATGGAAGAGATTC
CCGGAAGTCCACAGAAAAATTATTGCTAATTGTCCGAAATGAGAAGCAAAAATATTCTGATAAAGACGTCCCTCAGTAATATCATCACTGACTCTCGAAG
TCATGTGCGGTAGCAATACCAAACCAAATACGACGAGTAGTGGGGTCCTGAGCTAAGCCTTGGCTAAACCTTGGAAATCTTAATGCCATAATGCTTTTCA
AATCCTCCTAGACATTATCCTACTGCAATAATTCTTGCTAAGAAGAATGCCCACGTTGTGGCAATTCCACCCAGAAGGTAATGTGTTACTCCTACAGCAC
GTCCCTGTACAATGCTCAAGGCTCTAGGCTGAGTAGCAGGGGCAACTTTTAATTTATTATGAGCCCAAACGATGGATTCAATAAGTTCTTGCCAATAACC
ACGCCCGCTGAATAGAAACATTAAACTAAAAGCCCATACAAAATGGGCGCCTAAGAAAAAAAGACCATACGCAGATAATGAGGAACCATAAGACTGAATT
ACCTGGGATGCCTGCGCCCATAAGAAATCGCGAAGCCACCCATTAATGGTAATCGAACTCTGCGCAAAGTTTCCTCCTGTGATATGAGTTACTACTCTCT
GCATTTTCCAACTGAAATGGAATATTACTACAGAAATTGCATTGTACATCCAAAATAATCCTAGGAAGACATGATCCCAAGCGGATACTTGGCATGTCCC
CCCTCTTCCAGGGCCATCACAAGGGCACCGAAAACCAAGATTTGCTTTATCCGGTATCAATCGTGAGCTACGAGCAAATAGAACACCTTTTAGGAGTATC
AATACCGTCACATGAATTGTAAATGCATGAATATGATGTACCAAAAAATCTGCA