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Detailed information on CNT30683954


BLAST search results

BLAST vs Swiss-Prot:
sp|P58386|PSAB_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONOSAT000261, E-value = 2e-99

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30289362Triticum urartuTriticum aestivum23.6958.7999.85662forward
CNT3059930Triticum urartuArabidopsis lyrata9.6380.7889.96269forward
CNT30232496Triticum urartuAnanas comosus6.3429.8590.4177forward
CNT30205718Triticum urartuHelianthus annuus5.4837.8790.2153forward
CNT3024232Triticum urartuPopulus trichocarpa5.2371.2287.67146forward
CNT30147977Triticum urartuBrachypodium distachyon22.4451.1897.29627forward
CNT30103614Triticum urartuOryza rufipogon24.810096.83693forward
CNT30578211Triticum urartuOryza barthii7.6634.9790.65214forward
CNT30496729Triticum urartuDigitaria exilis36.3399.896.261015forward

Expression of CNT30683954

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MTFEIMCGSNTKPNTTSSGVLSLALAKPGKS*

>peptide 2 (54 aa)
MRPKQKYHKYPRPWPSQGKLFPKSFLSGINLEPRASKAPFTKINVVVCKPRAIA*

>peptide 3 (40 aa)
IHTNTKGYFILTNWILLHPVTNTHKPFLEVRVRIAQNVDS*

>peptide 4 (39 aa)
MIQNFLAKLHETDFRTSIERLLLIAQSEKQKCSDKDVLQ*

>peptide 5 (38 aa)
MSRLYPLGKYRFDQDLLFWSTKSKHDVVMNIKAQGMES*

Sequence

>CNT30683954
AAATCCATACAAATACGAAAGGGTATTTTATCCTTACCAACTGGATCTTGTTGCACCCGGTAACAAACACTCATAAACCATTTCTCGAAGTACGTGTCCG
GATAGCCCAAAATGTCGATAGTTAGCTCTAGGTCTTTCGGTCAAAAAACAACATCAATGAAGGCGTGTAGGTGCACTATTACGCAGTAGGGATTGCAATT
TTTCTCGCATTTTCATTTTTTTCACTCAAACTCAAGGGAGAAACTTTGCTTCTTATCTTTTTTTAAAGATTGATGAATCAAATGATATTTCTGTTCTAAT
TTCTGCCGCTTCTTCTCCCTCTGAATCAAACTTTTTTTTTCCATAATGTGTCGTTGCTATTATTGCCAAGTATACGGTTCTAATCCTAGATGGAAAAATA
AATAGAAAAAGAAATTTAAAAAGGTAGATCCTCCCTCTCTATCAAGAGTAATGAACTAGGTGCTGATACAGTACAAAAAAACAAACTAAATTAACCAAAC
TTGCCTGATGTTGAGGCAATCAAGAAAGCTGCATAAGTGAATATATAACCCACGGAAAAGTGAGCTAATCCAACCAATCTTGCTTGCACAATGGAAAGAG
CCACGGGCTTATCTCTCCAGCGAATTAAATTAGCTAAAGGGTGTGCGTTCATGAGCCCATGCTAAAGTCTCAATTAATTCCTGCAATACCCCCGCCAGGA
AATTAAGAACATAAATCCAGTAGCCCAAACAAGATGTCCAAATAAGAACATCCACGCCCATACCGATAAACTATTCATCCCAAAAGGATTATATCCATTG
ATAAGTTGTGAAGAGTTTAACCATAGGTAATCTCTTAACCATCCCATCAAATAAGTGGAGGATTCATTAAATTGTGAAACGTTGCCCTGCCATAATGTGA
TATGTTTCCAATGCCAATAAAAAGTAACCCACCCAATGGTATTTAACATCCAGAAAACTGCCAAATAAAATGCGTCCCAAGCAGAAATATCACAAGTACC
CGCGCCCTTGGCCGTCACAAGGAAAACTATTTCCAAAATCCTTTTTATCTGGCATTAATTTGGAACCGCGTGCATCTAAAGCGCCCTTTACTAAAATCAA
TGTAGTTGTATGCAAACCTAGAGCAATAGCATGATGAACCAAGAAATCCCCAGGTCCTATTGTTAAGAAAAGCGAATTACTATTCTCATTAACAGCATTC
AACCATCCGGGCAACCATAGGCTTCGACCCGCATTGAAAGCGGGGCCATTCGTTGAAGATAAGAGTATATCGAACCCATATGTCGTCTTGCCATGAGCAG
ATTGTATCCATTGGGCAAATATAGGTTCGATCAAGATTTGCTTTTCTGGAGTACCAAAAGCAAGCATGACGTCGTTATGAACATAAAGGCCCAAGGTATG
GAATCCTAGAAAGAGGCTAGCCCAACTTAAATGAGATATGATAGCTTCTTTATGGTCTAACATTCTTGCCAATACATTATCCTCATTCTGTTCCGGATTG
TAATCCCTAATGAAAAAAATAGCTCCATGAGCAAAAGCCCCTGTCATGATGAACCCTGCAATATATTGGTGATGAGTATATAAAGCAGCTTGAGTAGTAA
AGTCTTGTGCTATGAATGCATAAGGAGGTAAAGAGTACATATGTTGAGCTACTAAGGAAGTAATAACCCCTAAAGAAGCTAGAGCAAGACCTAACTGAAA
ATGAATCGAATTGTTGATTGTGTCATAAAGGCCCTTATGCCCACGCCCTAATCGACCCCCCGGAGGAGTATGCGCTTCTAAAAGATCTTTAATACTGTGC
CCAATTCCGAAGTTAGTTCGATACATGTGACCGCAATGAGAAAAATAAATGCAATAGCTAAATGATGGTGAGCCATATCGGTCAGCCACAAACTTTGTGT
TTGTGGATGGAATCCCCCAAGAAGAGTTAGAATGGCAGTTCCCGCTCCTTGAGCGGTACCAAATAAATGATTACTCGAATCAGGGTTTTGGGCATAAAGA
TTCCATTGACCCGTCAAAAGGGGTCCCAACCCCTGGGGATAGGGTAATACATCTAAGAAATTATTCCATCGAACGTACTCCCCCCTGGATGCGGGAATAG
CAACATGAACTAAATGTCCTGTCCAAGCCAAAGAACTTACCCCGAAAAGTCCTGACAAATGATGATTGAGACGAGATTCCGCGTTTTTGAACCACGAAAG
GCTTGGTTTCCATTTGGGTTGTAGATGTAACCAACCCGCTATTAAGGACAGCGTAGAAAGAAATAATAGAAAAAGAGCTCCAGTATAAAGATCCTCATTG
GTGCGTAATCCTATTGTATACCACCACTGATAAACTCCAGAATAAGCAATATTCACTGGACCAGCAGCACCTCCTCGAGTAAAGGCTTCCACAGCGGGTT
GACCAAAATGAGGATCCCAAATCGCATGAGCAATAGGTCTTACGTGTAAAGGATCCTGTATCCATGATTCAAAATTTCCTTGCCAAGCTACATGAAACAG
ATTTCCGGACGTCCATAGAAAGATTATTGCTAATTGCCCAAAGTGAGAAGCAAAAATGTTCTGATAAAGACGTTCTTCAGTAATATCATCATGACTTTCG
AAATCATGTGCGGTAGCAATACCAAACCAAATACGACGAGTAGTGGGGTCCTGAGCTTAGCCTTGGCTAAACCTGGGAAATCTTAATTCCATAATGCCTT
TCAAATCCTCCTAGCCACTATCCTACTGCAATAATTCTCACTGAGAAGAATGCCCATGTCGTGGCAATTCCACCCAGAAGGTAATGGGTTACTC