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Detailed information on CNT30273403


BLAST search results

BLAST vs Swiss-Prot:
sp|P92979|APR1_ARATH, E-value = 3e-153

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520490Chenopodium quinoaSetaria italica6.0723.8283.62116forward
CNT30513945Chenopodium quinoaJuglans regia8.5829.583.54164forward
CNT3019826Chenopodium quinoaCitrullus lanatus6.6946.5583.59128forward
CNT3070096Chenopodium quinoaQuercus suber7.7458.0482.43148forward
CNT30711542Chenopodium quinoaGlycine max6.2230.0584.87119forward
CNT3044335Chenopodium quinoaPrunus dulcis9.2145.8385.23176forward
CNT30265236Chenopodium quinoaBrassica rapa5.392585.44103forward
CNT3013232Chenopodium quinoaZea mays6.0725.4983.62116forward
CNT30218205Chenopodium quinoaKalanchoe fedtschenkoi8.4221.9980.12161forward

Expression of CNT30273403

Peptides detected in this lncRNA

>peptide 1 (31 aa)
RLCACIDYIRKMCSLTVLEILVCKNRLPSHE*

>peptide 2 (40 aa)
MLQANPTLSMSHCHPSPRQLTLELINFGLDKTNCSKPLSD*

Sequence

>CNT30273403
CTCGGCTGTGTGCCTGTATTGATTATATTAGGAAAATGTGCTCCTTAACTGTATTAGAAATTTTAGTATGTAAGAACAGATTACCGTCTCACGAGTAATT
ACAGCAAGTATAATTAGTAACAAGCAGAACATCAGAAAATAAACCTATTCCTGAAAATTTTGAGCTTCACAAGCTTGAGTTATGTTGCAAGCTAACCCAA
CCTTAAGCATGAGTCATTGTCACCCTAGTCCTAGGCAACTAACACTGGAGTTGATCAATTTCGGGTTAGACAAAACAAACTGTTCCAAACCTTTAAGTGA
CTGAATCAGTGCCGGTGCTCGGTGCAGCCTGACACACTGTTCCTGTAGTGAATTAGCCTTGATACTACATTCATCGGTGTATAGCTATATTCTATGCCTT
TTGAGATGTAGGAACAGATGAATCAGTGTTAAATAAATGAACAAAATTGAAACCATTTCCAGAAAAACTCAGATTTATTTGGTGTAATTTTTCTGATACA
GCAAATGAGATTCTAACACAGCCCTTCACAATGTACATATAGCCTCACCATTTGAACACCAAAATTTTATACCCTTTCCCATCAAAAAACAAAAGAAAAA
AAGAAACAGAGATTTAAAAGCTATATAAACATGCCATCTCCAACTTGTAACTAAACAAGTCATAATGTAGCTCACTATTGACTACAAAAGAACCTCCCTT
AGAATCATAAGGGGGATCATATCCGGTAAAACTGAACTAGCTTCTCGGGTTATCTTCCAGTTTGCCATCATTCGGTTATGTTTTAGCTTTCTTCTCTGAT
ATCTACGAAATGTATAACAGCTGTTTAACGCTGATCATTATCTGAGAGCATTGATGAAAGCCAAGAGTGAATCCACATCACGGTTTTCTGAAGGGTACTT
GATGGGCTGAGATGAGTGTTTTGGGAAGAGAAGGATAGTTGGGAAGCTTCCGAGCTGCAATTCACTCTTGGCAAATGCCTTCTGATCACCATCGGCCCTG
AACTTTCCTACCTTGACACCACTTCCAGCCAATTTGTCAGCCAGCTCTAGGTATGAACCTTCCATTGCCTGTTCAAACATAAAAAATAAAAAATATCAGT
TAGTATAACCAACATTCTGCTAGATCAATATCAATGCAGGCGGATGCAAAAGAAAATCGGTGTCTAACCTGGCAAAATTGGCACCATGGTGCATAGAGGA
CGACAACCCATGGGTCTCTCCTGTCTTCCAATCTCATCAAGTTCTCAATTCCAGCTCTAGTCAACAAAACTAAGTTTTCTGACTCAAAAATGTCAGCAAC
CTCTTCATTTGATTGAGCACTACCATTCTGATTTTCGGAATTTTCTTTAATATTACCCTTGTGAAGGCCACACTCCTTCGCCTTGGCATCTTCCCACCAC
CACCTTCCTTCTCTCTCGTGCTGTCCAGGCAAAACAGGCCTTGTGCATGGCTCACACCCGATTGAGACGTATCCTTGGGAGTGCAATGAGTTAACAGGCA
CATTCATAGTCCTAAGGAAGTTCCACACATTGTCACCCTCAACATTGGCAACAGGGGTCCACTTGAACAACAGGGACTTCAGAGCGAGTCCCAGGAGACT
GGTCCTTCCTCTGCCCGGTAATCCAGGCTCGTAGACCCTTCAAGGCCCTCCTAAGTGGCCTCACCTTCCTTACACGGCAGCACTCCTGGTGTCCATCCTC
GTAGAAAGAGAACAACCCCTTGTTCCTAACTAGACCCTGAACTTCTACTGAATCAGGGAACATGTACTCAATGCGGATGCCATAGTGTTTTTCAACCTCA
TCGAAAAACCGGTAGGTTTCAGGATTCAATCTTCCAGTGTCCAAGCTGAAGACTCTGAAGGGTCTGCCGGTTAATTTGGCATACTCGATCAAAGCAACAT
CTTCCGCACCAC