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Detailed information on CNT30218205


BLAST search results

BLAST vs Swiss-Prot:
sp|P92981|APR2_ARATH, E-value = 5e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30273403Kalanchoe fedtschenkoiChenopodium quinoa21.998.4280.12161forward
CNT3019826Kalanchoe fedtschenkoiCitrullus lanatus19.1350.9183.57140forward
CNT3044335Kalanchoe fedtschenkoiPrunus dulcis21.3140.6282.05156forward

Expression of CNT30218205

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MAHIAQQSKSPCGSPIWPSSQYRFYSRELTGTPIALRKFHTSVPSTLATGLNFTRLPAPPSSPSKTGSTCTTGTSALVPGD*

>peptide 2 (31 aa)
WRMSIGSQGQLTWHYWFCSSPSFEQFDKGHQ*

Sequence

>CNT30218205
GTGGAGGATGAGCATTGGGTCTCAAGGGCAACTTACATGGCACTACTGGTTTTGCAGCTCACCATCATTTGAGCAATTTGACAAAGGACATCAATGAATC
CACATCCCGCTTCTCAGTAGGGTACTTAATGGGCTTTGAAGCATGCTTGGGGAAGAACAGAATGCTAGCTTATCTGCCAAGTCCACAAATGAGGCGTCCA
TAGCCTGAATAAGAAACAAGAGATAAGTCAGCCAAATACTCTTTTTGTTTTTGATATACAATTGAGACCAGTGCATCAAAGTTAACTGATTCAAGGGTGT
TTACCTGGCAGTATTGGCACAATGGCGCATATAGCACAACAATCCAAGAGTCCTTGCGGTTCTCCAATCTGGCCAAGTTCTCAATACCGGTTCTACTCAA
GAGAATTGACAGGCACACCCATTGCTCTGAGGAAATTCCACACATCTGTCCCCTCAACATTAGCTACGGGGTTAAACTTCACTAGGCTGCCAGCTCCGCC
ATCAAGCCCTTCAAAGACAGGATCAACTTGTACAACAGGGACTTCTGCCCTAGTGCCAGGAGACTGATCCTTCCTTTGCCCAGTGATCCAAGCACGCAAT
CCTTTCAGGGCTCTCCTCAAAGGCCTGACCTTCCTCACTCTGCAGCATTCTTGATGCCCATCTTCATAGAAAGAGAACAGCCCCTTAGTCCTCACCAATG
CCTGCACCTCAGTGGTGTCAGGGAACATGTAC