Detailed information on CNT3070096


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30273403Quercus suberChenopodium quinoa58.047.7482.43148forward
CNT30711542Quercus suberGlycine max66.6742.9382.94170forward
CNT3074458Quercus suberBrassica juncea27.8413.2285.9271forward

Expression of CNT3070096

Peptides detected in this lncRNA

>peptide 1 (61 aa)
HKWFSIPITREHSQKPSRNQHPYSQRDTLLAETSVLGRKVLWGSFLIAVLSGHTPSDHHLL*

>peptide 2 (45 aa)
INGFQFPSLESIHKSHQGINIPILRGILYWPRRVFWEEKYCGEAS*

Sequence

>CNT3070096
CCATAAATGGTTTTCAATTCCCATCACTAGAGAGCATTCACAAAAGCCATCAAGGAATCAACATCCCTATTCTCAGAGGGATACTTTATTGGCCGAGACG
AGTGTTTTGGGAAGAAAAGTATTGTGGGGAAGCTTCCTAATTGCAGTTCTCTCTGGGCATACTCCTTCTGATCACCATCTGCTCTGAACTTTCCCACCTT
CACCCCACTCCCTGCCAACTTCTCAGCCAATTCAACATATGATGCTTCCATTGCC