Detailed information on CNT30162946


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515237Pistacia veraJuglans regia41.745.3286.8191forward
CNT30632298Pistacia veraVigna unguiculata35.326.5490.9177reverse complement
CNT30201858Pistacia veraPisum sativum46.7914.887.25102reverse complement
CNT30708700Pistacia veraGlycine max22.0219.5189.5848reverse complement
CNT3048549Pistacia veraPrunus dulcis41.7410.5690.1191reverse complement
CNT3086189Pistacia veraVigna radiata35.3218.6988.3177forward
CNT30144549Pistacia veraMedicago truncatula42.228.4885.8792reverse complement
CNT3082972Pistacia veraBrassica juncea43.124.6188.394reverse complement
CNT30605830Pistacia veraGossypium raimondii42.6615.187.193forward
CNT30716815Pistacia veraMalus domestica golden41.7414.9986.8191reverse complement
CNT30627897Pistacia veraDaucus carota26.153.7987.7257forward
CNT30723531Pistacia veraLupinus angustifolius40.833.6586.5289reverse complement

Expression of CNT30162946

Peptides detected in this lncRNA

>peptide 1 (29 aa)
FEILVRGVPSLFNARHNEYKDLQNALFVL*

Sequence

>CNT30162946
GATTTGAGATATTGGTAAGGGGAGTACCTAGTCTATTCAATGCTAGGCATAATGAGTATAAGGACCTACAAAATGCTCTTTTTGTCTTATGAACCTTGAT
TCGTTAATCAGGATGATAGAGACTCTATTTAACTTATGTTGATCTAGGCCAGAAGCAGACCTACGTTAAGATAACCTTTCTTTAAAAGACTTTGGTAATG
CTCCTATATCATAATCCA