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Detailed information on CNT30716815


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515237Malus domestica goldenJuglans regia61.7821.9486.4375reverse complement
CNT30201861Malus domestica goldenPisum sativum51.0745.0684.52310reverse complement
CNT30162946Malus domestica goldenPistacia vera14.9941.7486.8191reverse complement
CNT30283743Malus domestica goldenTriticum aestivum2915.4886.93176forward
CNT30144549Malus domestica goldenMedicago truncatula13.0124.4688.6179forward
CNT3082972Malus domestica goldenBrassica juncea39.2111.6783.61238forward
CNT30627897Malus domestica goldenDaucus carota76.1130.784.2462reverse complement
CNT30723531Malus domestica goldenLupinus angustifolius78.4219.5184.45476forward

Expression of CNT30716815

Peptides detected in this lncRNA

>peptide 1 (64 aa)
YIYKYIAYFHFLFIFLFSFLGFRAIRTRIVDLLCKKDQTSYYQNDLNCFKDPTCIFLHWALFIN*

Sequence

>CNT30716815
TATATATATAAATATATAGCATATTTTCATTTTCTTTTCATTTTTTTATTTTCATTTTTAGGTTTTAGGGCTATACGGACTCGAATCGTAGACCTTCTCT
GTAAAAAAGATCAAACTTCTTATTATCAAAATGATTTAAACTGTTTCAAAGACCCAACGTGCATTTTTTTGCATTGGGCTCTTTTCATTAACTGATATAA
ATATCGGCTAGTCTACCACATTTTTCTTGACAGAAAGATAAAAAGATGGTTCCACGTGTGCTCTGATTTATTATGTGGATTCACTCCAATCCAGGAGCAC
TACCAAAGTGTTTCAAAGAAGGGTTATCCTGACGAAGGTATGCTTCTGTCCTAGATCAACTTAAGTTAAATATAGTTTCTATCGCCCTCTTGAATCAAAA
ATGAAACTTCATACACATTAAAGTTCATAAGAACGAAAAGAGAGTTTTTTTGAGGTCCTTATACTCATTATGCCTGGCATTGAATAGACAGGGAATTCAC
CTTATCAATATCTCAAATCAATGAGGGGTTCTGACACCTAAATAGGCAACCGAATCGGACCAAACCCTTTGTCAGGCTATTGTTCTCTTGTTTTGTTCCC
TAAAAGC