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Detailed information on CNT30632298


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697664Vigna unguiculataOryza sativa5.0121.5389.8359reverse complement
CNT30201861Vigna unguiculataPisum sativum58.4510085.47688reverse complement
CNT30708700Vigna unguiculataGlycine max20.5698.3791.32242forward
CNT3048549Vigna unguiculataPrunus dulcis21.4129.2381.75252forward
CNT30162946Vigna unguiculataPistacia vera6.5435.3290.9177reverse complement
CNT3086189Vigna unguiculataVigna radiata26.4275.4996.46311reverse complement
CNT30144549Vigna unguiculataMedicago truncatula25.8394.1285.86304forward
CNT30723531Vigna unguiculataLupinus angustifolius59.7328.8182.79703forward

Expression of CNT30632298

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MFSIDEKWVFTLSISQINYGFDFMAKPFVRLVFSCFVP*

>peptide 2 (30 aa)
MLFFFICITIKEHYQSVSKKDYLDVGLLLA*

>peptide 3 (38 aa)
MFSIDEKWVFTLSISQINYGFDFMAKPFVRLVFSCFVP*

Sequence

>CNT30632298
CATAAAAGTACTCCTCTGAATGTAGAAAATATACCAAATTCATTTTCATTTTTAGTCTAAAGTCTCCATTTTTTTAGACTAGCTGAATATACTAATATTA
ATATTATTCTATCGAATATGAATATGTTCGAATAGAAAGTTACAAATTGTTTTTTTTTTAGTAATAGTCTTAGTAATGAGATCTATTCGATCCAAAATAG
TATTAATATTATTAGTATCTGTAGGAATATTAGGGCTATACGGACTCGAACCGTAGACCTTCTCGGTAAAACAGATCAAACTAATTATTATCTAAATGAT
TTAAATTGTTTTCAAAACCCAACATGCATTTTTTTTTTGCATTGAGCTTTTTCATTAACTGATAAAAATATTAGTTAGTCCACCATCTTTTTTTTTTTTT
ACAGTAAAGAATAAAGAGATGATTCCCTATGCTCTTCTTTTTTATTTGTATAACAATCAAAGAGCACTACCAAAGTGTTTCAAAGAAGGATTATCTTGAC
GTAGGTCTGCTTCTGGCCTAGATCAACTTAAGTTAAATGGACTCTTTATCCACCTACTAAAATTAAAATAGAAGATAAGAAATGACACTTCATACACCTT
AAAGTTCATAAAATAGGAAGAAAAGATAATCTTTTTTAGGTCCCTATACCCTTTATGTTTAGCATTGACGAGAAATGGGTATTCACCTTATCAATATCTC
AAATCAATTATGGATTCGATTTTATGGCTAAACCCTTTGTCAGGCTAGTGTTCTCTTGTTTTGTTCCTTAAAATGGAGTAAGACACCGATTTCTTACTAT
AAGATAAACTTTTTTAATTACAAGATGAACTCCTCTGAAAAAAAGCATTGGCGCTCGTGTAAACGAGGTGCTCTACCTAACTGAGCTACAGCCCTTGTAG
TAAAATAGGAAGAAAAGATAATCTTTTTTAGGTCCCTATACCCTTTATGTTTAGCATTGACGAGAAATGGGTATTCACCTTATCAATATCTCAAATCAAT
TATGGATTCGATTTTATGGCTAAACCCTTTGTCAGGCTAGTGTTCTCTTGTTTTGTTCCTTAAAATGGAGTAAGACACCGATTTCTTACTATAAGATAAA
CTTTTTTAATTACAAGATGAACTCCTCTGAAAAAAAGCATTGGCGCTCGTGTAAACGAGGTGCTCTACCTAACTGAG