Detailed information on CNT30705055


BLAST search results

BLAST vs Swiss-Prot:
sp|P12333|CB2A_SPIOL, E-value = 8e-117

BLAST vs NONCODE:
NONBNAT007398, E-value = 5e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514020Prunus aviumJuglans regia48.7334.887.66308forward
CNT30380511Prunus aviumManihot esculenta56.9651.1483.61360forward
CNT30404250Prunus aviumBeta vulgaris62.3438.481.22394forward
CNT30709062Prunus aviumGlycine max57.9145.4185.25366forward
CNT3046617Prunus aviumPrunus dulcis99.2191.2797.61627forward
CNT30145222Prunus aviumMedicago truncatula60.7657.3183.85384forward
CNT30310534Prunus aviumCamelina sativa62.8233.5381.36397forward
CNT30217700Prunus aviumKalanchoe fedtschenkoi62.9750.4484.17398forward
CNT30359252Prunus aviumLactuca sativa57.2839.2685.08362forward

Expression of CNT30705055

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVTRPSPTMLETEEPSLTAWPAREGEERAIVEEAI*

>peptide 2 (29 aa)
MAHLEWITSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT30705055
AACTCTGTAACCTTCCACTGCGCCCATCAAGATAACTTGTGTGGCCCAGATAGCCAAAATGCTTTGGGCATGGACTAAGCTTGGGTTTCCCAAGTAGTCT
AGCCCACCCTCACTGAATATCTGGGCTCCAGCCTTGAACCATACAGCCTCACCGAACTTGACCCCGTTACGAGACAAGAGTTCGGGGAAAACGCAGCCCA
GAGCACCGAGCATGGCCCATCTTGAATGGATAACTTCAAGCTCACGGTTCTTGGCAAAGGTCTCTGGGTCAGCTGAGAGCCCAGCAGTGTCCCAACCGTA
ATCGCCAGGGAATTCTCCAGTGAGGTAAGAAGGGGCCTCGCCAGAGAACGGGCCCAAGTATTTGACACGGTCCGGGCCGTACCACGGGCTGCCGGATGAA
ACATTTTTGGACTTGGATGCGGTTTTGCGCATGGTAACTCGGCCCTCACCAACAATGTTAGAAACAGAGGAACCGAGCTTGACAGCTTGGCCAGCAAGAG
AAGGGGAGGAGAGAGCCATTGTTGAAGAAGCCATTTGAGGAAAAATGAAAGTGTATTATTTGTGAAAATCTTCAGTCTCTTAGACAATGTGAGAGGGGCG
AGTGCTTATTTTCTTTGGGAAGAAGAGACGTT