Detailed information on CNT3046617


BLAST search results

BLAST vs Swiss-Prot:
sp|P12333|CB2A_SPIOL, E-value = 1e-131

BLAST vs NONCODE:
NONBNAT005173, E-value = 3e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30269327Prunus dulcisChenopodium quinoa60.8447.7784.21418forward
CNT30380511Prunus dulcisManihot esculenta52.451.1483.06360forward
CNT30404250Prunus dulcisBeta vulgaris59.9740.1681.31412forward
CNT30503719Prunus dulcisNicotiana attenuata50.9559.3284350forward
CNT30234656Prunus dulcisBrassica oleracea57.7972.4581.61397forward
CNT30171121Prunus dulcisTrifolium pratense40.93282.92281forward
CNT30145222Prunus dulcisMedicago truncatula55.957.3183.33384forward
CNT30217700Prunus dulcisKalanchoe fedtschenkoi60.1252.3484.5413forward
CNT30359252Prunus dulcisLactuca sativa57.0642.5285.2392forward
CNT30705055Prunus dulcisPrunus avium91.2799.2197.61627forward

Expression of CNT3046617

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MDNFKLTVLGKGLWVSREPSSVPTVITGEFSSEVRRGLARERAQVFDTVRAVPRAAG*

>peptide 2 (29 aa)
MAHLEWITSSSRFLAKVSGSAESPAVSQP*

>peptide 3 (35 aa)
MVTRPSPTMLETEEPSLTAWPAREGEERAIVEEAI*

Sequence

>CNT3046617
TGGGTCAAAGCTCCCACCTGGATATAATGGGTCAGTGATCTCTCCGAGAGGCCCACCTGCAACTCTGTAACCTTCCACTGCACCCATCAAGATAACTTGT
GTGGCCCAAATTGCCAAAATGCTTTGGGCATGGACTAAGCTTGGGTTTCCCAAGTAGTCTAGCCCACCCTCACTGAATATCTGGGCTCCAGCCTTGAACC
ATACAGCCTCACCGAACTTGACCCCGTTACGGGACAAGAGTTCAGGGAAAACGCAGCCCAGAGCACCGAGCATGGCCCATCTTGAATGGATAACTTCAAG
CTCACGGTTCTTGGCAAAGGTCTCTGGGTCAGCCGAGAGCCCAGCAGTGTCCCAACCGTAATCACCGGGGAATTCTCCAGTGAGGTAAGAAGGGGCCTCG
CCAGAGAACGGGCCCAAGTATTTGACACGGTCAGGGCCGTACCACGGGCTGCCGGATGAAACATTTTTGGACCTGGATGTGGTTTTGCGCATGGTAACTC
GGCCCTCACCAACAATGTTAGAAACAGAGGAACCGAGCTTGACAGCTTGGCCAGCAAGAGAAGGGGAGGAGAGAGCCATTGTTGAAGAAGCCATTTGAGG
AAAAATGAAAGTGTATTATTTGTGAAAATCTTCAGTCTCTCAGACAATGTGAGAGGACCGAGTGCTTGTTTTCTTTGGGAAGAAGAG