Detailed information on CNT30200969


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30145222Pisum sativumMedicago truncatula56.3742.2489.75283forward

Expression of CNT30200969

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MDDDDDAAIVCVYCNELKRLLALIIVFLSMPWMMMMMRPSCVYIAMKLKRLLCF*

>peptide 2 (37 aa)
RFLENVSGSAESPAVVPTVVTAELSCQVGWRLTGEWA*

>peptide 3 (34 aa)
MDDDDDAAIVCVYCNEIEKIVMLLIIVFLSMVIL*

>peptide 4 (30 aa)
MGFQRKLLSCGSRLLMVNLAAPNSCLMGSA*

>peptide 5 (63 aa)
TVLGECLWVSRESGSCPNRSHRGTLLSSRMETHRRMGLSTNTVWSVPWASRGSYFLVVADSSW*

Sequence

>CNT30200969
CACGGTTCTTGGAGAATGTCTCTGGGTCAGCAGAGAGTCCGGCAGTTGTCCCAACCGTAGTCACCGCGGAACTCTCCTGTCAAGTAGGATGGAGACTCAC
CGGAGAATGGGCCTAAGTACTAACACGGTCTGGTCCGTACCATGGGCTTCCAGAGGAAGCTACTTTCTTGTGGTAGCAGACTCCTCATGGTGAACCTTGC
AGCTCCCAATTCTTGCTTGATGGGGTCAGCTTGAGTTGCTTGCCAGCACAAGTTGGAGAAGAGAGAGCCATGGATGATGATGATGATGCGGCCATCGTGT
GTGTATATTGCAATGAATTGAAAAGATTGTTAGCTTTGATAATTGTATTCTTATCAATGCCATGGATGATGATGATGATGCGGCCATCGTGTGTGTATAT
TGCAATGAAATTGAAAAGATTGTTATGCTTTTGATAATTGTATTCTTATCAATGGTGATTTTGTAAGATGAATATGAGTCTGTATTTATAATACAGATGC
TC