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Detailed information on CNT30171121


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 9e-90

BLAST vs NONCODE:
NONMTRT001605, E-value = 9e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514140Trifolium pratenseJuglans regia56.3849.581.62495forward
CNT30628823Trifolium pratenseVigna unguiculata46.4779.8484.31408forward
CNT30200636Trifolium pratensePisum sativum21.7541.1688.48191forward
CNT30709869Trifolium pratenseGlycine max46.5868.5182.4409forward
CNT3046617Trifolium pratensePrunus dulcis3240.982.92281forward
CNT30234693Trifolium pratenseBrassica oleracea21.8743.9487.5192forward
CNT30145222Trifolium pratenseMedicago truncatula30.7540.392.22270forward
CNT3078263Trifolium pratenseBrassica juncea22.5525.4588.38198forward
CNT30202642Trifolium pratenseHelianthus annuus34.5154.483.17303forward
CNT30409978Trifolium pratensePapaver somniferum29.2726.9485.21257forward
CNT30705057Trifolium pratensePrunus avium3233.9883.99281forward
CNT3055216Trifolium pratenseAmborella trichopoda50.5749.0681.31444forward
CNT30176338Trifolium pratenseVigna angularis45.2243.7783.38397forward
CNT30725369Trifolium pratenseLupinus angustifolius58.251.183.56511forward

Expression of CNT30171121

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MVNFATPNSWLEGVSLTGLPAKAGEVRAMDDAAIFFLQRNQNACSVLIFVLL*

Sequence

>CNT30171121
ACTTGCATACAACACATGATAATAATTCACATTCCCTGAGGAAAACATTACAATAAGGTATACTGAACAGAAAACACAAGACCGCGCTCACTCGCTCACT
TTCCGGGAACAAAGTTGGTGGCAAAAGCCCAAGCGTTGTTGTTGACTGGGTCAGCAAGATGGTCAGCAAGGTTCTCCAAAGGACCCTTTCCGGTCACAAT
AGCCTGGACAAAGAATCCAAACATAGAGAACATAGCTAACCTACCGTTTTTGAGTTCCTTAACCTTTAATTCTGCGAAAGCTTCTGGCTGCCACCTGGGT
AAAGTGGGTCAACTACTTCACCAAGAGGCCCACCTGCAATACGGTATCCTTCAACTGCGCCCATCAAGATAACTTGAGTGGCCCAGATGGCAAGGATACT
TTGAGCGTGGACCAAACTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTAAAGATTTGAGATCCGGCCTTGAACCAAACAGCCTCACCGAATTTAACA
CCGTTGCGAGACAAAAGCTCCGGGAAAACACATCCCAAGGCTCCTAACATAGCCCATCTAGAGTGGATAACTTCAAGCTCACGGTTCTTGGCGAATGTCT
CTGGTCAAGTAAGACGGGGGCTCACCAGAGAATGGGCCTAAGTACTTAACACGGTCTGGGCCGTACCATGGGCTTCCAGAGGAGGCTACTTTCTTGGTGG
TAGCACCCTTCCTCATGGTAAACTTTGCAACTCCCAATTCTTGGCTTGAGGGGGTCAGCTTGACTGGCTTGCCAGCCAAGGCAGGTGAAGTGAGAGCCAT
GGATGATGCGGCCATTTTTTTTTTGCAACGAAATCAAAATGCTTGTTCTGTTTTGATATTTGTACTCTTATGAATGGT