Detailed information on CNT30143319


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-156

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-127

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691368Lolium perenneOryza sativa77.331.2191.92681forward
CNT30190365Lolium perenneSecale cereale76.6263.3291.7675forward
CNT30225636Lolium perenneHordeum vulgare69.2472.6292.13610forward
CNT30254194Lolium perenneAvena sativa78.0973.1994.04688forward
CNT30722254Lolium perenneTriticum spelta72.4297.493.42638forward
CNT30595696Lolium perenneOryza meridionalis77.364.0692.51681forward
CNT30583684Lolium perenneEchinochloa crusgalli77.0732.3590.28679forward
CNT30603673Lolium perenneOryza punctata77.4168.9692.23682forward

Expression of CNT30143319

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVIVLPVKVFT

>peptide 2 (29 aa)
LITGNFEVHLFIFERDCCTSNCSSRNQHK*

>peptide 3 (61 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVFPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 4 (52 aa)
MRRCWSGGIPSLSWILALTLSMVSELSTSRVMVFPVRVFTKICIPPRRRRTR*

Sequence

>CNT30143319
AATTGATCACAGGAAACTTCGAAGTTCATTTATTCATATTTGAACGGGACTGCTGTACCAGCAACTGTTCTTCACGAAACCAACACAAATAGGGGACTCG
ACGGTCCATTAAACCAGACACAGTACTTCAAACGAGACAGACACAATTTCAAGGGCGACAACAAGGCAGCCCACCAGAAGCAGCTCCAACACCAAGACAC
TTACTGACCACCGCGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCG
AAGATGAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAGAGTGATGG
TCTTCCCAGTCAGGGTCTTCACGAAGATCTGCATACCACCACGTAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGT
ACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTG
TCAGAAGACTCCACCTCAAGGGTGATGGTCTTCCCAGTGAGGGTCTTAACGAAGATCTGCATACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACT
CCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTG
GATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAAAGTCTTCACAAA