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Detailed information on CNT30583684


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-152

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-96

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519947Echinochloa crusgalliSetaria italica32.4478.189.87681forward
CNT30641434Echinochloa crusgalliNymphaea colorata32.5964.5985.67684forward
CNT30225636Echinochloa crusgalliHordeum vulgare29.0672.6289.84610forward
CNT30553813Echinochloa crusgalliOryza glaberrima32.7873.5886.92688forward
CNT30254194Echinochloa crusgalliAvena sativa33.0673.8389.34694forward
CNT30461176Echinochloa crusgalliSaccharum spontaneum34.421.1891.14722forward
CNT30143319Echinochloa crusgalliLolium perenne32.3577.0790.28679forward
CNT307928Echinochloa crusgalliZea mays34.5460.8289.24725forward
CNT30229076Echinochloa crusgalliAnanas comosus32.7353.2186.46687forward
CNT30722254Echinochloa crusgalliTriticum spelta30.8298.7889.03647forward
CNT30349330Echinochloa crusgalliEragrostis tef21.4929.191.35451forward
CNT30363345Echinochloa crusgalliSorghum bicolor34.0678.4990.49715forward
CNT30370375Echinochloa crusgalliOryza glumipatula33.1172.8586.62695forward
CNT30100520Echinochloa crusgalliOryza rufipogon32.8369.4687.81689forward
CNT30116852Echinochloa crusgalliOryza nivara31.1154.9788.06653forward
CNT30604148Echinochloa crusgalliOryza punctata32.4980.6187.54682forward

Expression of CNT30583684

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MADARQPRYSSSFNDQWLTDHRGDEAPGGGCSPSGCCSPQECGRPRAACQRR*

>peptide 2 (53 aa)
MPSLSWILALTLSMVSEDSTSRVIVLPVKVLTKICMPPLRRRTRWRVLSFWML*

>peptide 3 (55 aa)
MHVSQVLRHGETAAYIYLHLSKHIQSIQHLNHEHTCDPSIFKLSPKASWEGLILL*

>peptide 4 (55 aa)
MSRCWSGGMPSLSWILALTLSIVSEDSTSRVIVLPVRVFTKICICRRIARQQVSN*

>peptide 5 (73 aa)
MPDNPGTAAASTTSGLLTTAETKHQVEGALLLDVVVRKSAAVLELLASEDEPLLVRGNTLLVLDLGLHIVNGV*

>peptide 6 (91 aa)
HQHINWHNQNSEMHNKRITDFSSNIIYSSAILLHQQLLRANTQSCKFMKPNTTTTDRYFRDDTDTSKTTDTLHGRCQTTQVQQQLQRPVAY*

>peptide 7 (42 aa)
MNVLLSPRWSGLHHRETAAYIYAYLRIPQIILNMYVQFKSKN*

>peptide 8 (52 aa)
MSLCWSGGIPSLSWILAFTLSMVSELSTSRVMVLPVKVFTKICIPPLRRSTK*

>peptide 9 (37 aa)
INILTGIIKIQKCITNGSQILVQTSFILQQYCCTNNC*

>peptide 10 (41 aa)
MSLRFCVMEKQQHIYIYTYLSTSNPSNILIMSIHVIQAYSN*

Sequence

>CNT30583684
CATCAACATATTAACTGGCATAATCAAAATTCAGAAATGCATAACAAACGGATCACAGATTTTAGTTCAAACATCATTTATTCTTCAGCAATACTGCTGC
ACCAACAACTGTTAAGGGCAAACACACAGAGTTGCAAATTCATGAAACCAAACACCACTACGACAGACAGATACTTCAGAGACGACACAGATACTTCGAA
GACGACAGACACCCTTCATGGCAGATGCCAGACAACCCAGGTACAGCAGCAGCTTCAACGACCAGTGGCTTACTGACCACCGCGGAGACGAAGCACCAGG
TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGCAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGAATAC
CCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCAACCTCCAGAGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATTTG
CATCCCTCCCCTCAGGCGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAG
ATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCTGAAGACTCCACCTCAAGGGTGATAGTCT
TGCCGGTCAAGGTCTTAACAAAGATCTGCATGCCTCCCCTGAGACGGAGAACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCG
CCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCG
GAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATCTGCAGAAGAATAGCCAGACAACAGGTTAGTAATTAGCAGT
AGACAATGAAATGATTTTAATCAAACAGAACCCGCATATACAAACCGATACTAACAGTTCATGCATGTTCTTCAATATTAGATAGTACTACACAATCATC
AAACAGCTGCAGTATCACCTCATCCAAGTATATTAACAAGTAACAGCAGCATGCATAATAATCAGATATACTAAAGAATTATAAACAGCAACAGTAGTAA
ATCATGAATGTCTTGCTAAGCCCACGTTGGTCAGGTTTACATCACAGAGAAACAGCAGCATATATCTACGCCTATCTAAGGATACCACAAATCATCTTAA
ACATGTACGTTCAATTTAAGAGCAAGAACTAGTTGAAAAGATGATATAATCATGCATGCCTAATAACTAAACAACACGAGGATGCATGTCTCTCAGGTTC
TGCGTCATGGAGAAACAGCAGCATATATATATCTACACCTATCTAAGCACATCCAATCCATCCAACATCTTAATCATGAGCATACATGTGATCCAAGCAT
ATTCAAATTAAGCCCAAAAGCTAGTTGGGAAGGTCTTATTCTACTCTGATCTTAAGACTCAATCAGACCACGACCAAACCTTGAACATGCTAACAGAATC
CATCTGACGAATCCGGAGCATAAACATGCATTTGTAGGTACGAGATACACAAAGCGAATCCGAAACACGACCAGACCTAGCTAACCCTAGCAAACTACCC
AGCAAACATGCGAACGACCCCATCTACGGACAGAATAAAAGCACCTCCGCAATCCCCAACCTAAATCCCCCACAAATCGAACGCGCTTGACAAGCTTAGC
AGCATAACCTATCAGATCTACACGAAGTTCCACCTCCCATCCATCTACGAACAGAAGTAGCACGGATCGAACATGATTTCTCCAACGCCAAGGCCCTAAC
CAATCGACCAAGCAGAACTTCCAAAGCACCACGCCGATCAATCTAATCTAGAGGAGACGGGCCGATCAATCTAATCTAGAGGAGACGGGGGAGGAGGATC
GCCGTACCTTGAAGCGGGGGAAGGATCGCCGAGGCTCGCGAGAAGAAGAGCGATTTGGATCGGGGGTGTGTGCTCCGAGCAATGAAACGAGATGAGATT