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Detailed information on CNT30603673


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 4e-124

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-129

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691368Oryza punctataOryza sativa94.2442.7190.56932forward
CNT30528694Oryza punctataEucalyptus grandis69.3662.2588.05686forward
CNT3044343Oryza punctataPrunus dulcis66.5374.687.69658forward
CNT30190365Oryza punctataSecale cereale68.4563.5190.99677forward
CNT30305431Oryza punctataTriticum aestivum67.1457.6988.4664forward
CNT30226205Oryza punctataHordeum vulgare67.8565.0290.01671forward
CNT30586586Oryza punctataMusa acuminata69.7748.5287.1690forward
CNT30254194Oryza punctataAvena sativa69.9773.6291.47692forward
CNT30669573Oryza punctataTriticum dicoccoides69.9770.5488.29692forward
CNT30143319Oryza punctataLolium perenne68.9677.4192.23682forward
CNT307928Oryza punctataZea mays69.8757.9788.71691forward
CNT30229076Oryza punctataAnanas comosus69.3653.1487.61686forward
CNT30652435Oryza punctataRosa chinensis66.5361.1587.69658forward
CNT30689775Oryza punctataTriticum urartu69.9749.0888.87692forward
CNT30722465Oryza punctataTriticum spelta69.8761.289.73691forward
CNT30363345Oryza punctataSorghum bicolor69.6775.6387.66689forward
CNT30595768Oryza punctataOryza meridionalis93.4367.293.61924forward
CNT30704859Oryza punctataPrunus avium66.6354.5188.01659forward
CNT30107359Oryza punctataOryza longistaminata70.2781.8690.36695forward
CNT30149632Oryza punctataBrachypodium distachyon67.3469.4590.09666forward
CNT30100520Oryza punctataOryza rufipogon94.0393.7589.14930forward
CNT30583334Oryza punctataEchinochloa crusgalli69.9732.1987.43692forward
CNT30116053Oryza punctataOryza nivara70.2798.8691.37695forward
CNT30174646Oryza punctataVigna angularis67.0463.6387.18663forward

Expression of CNT30603673

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVIVLPVNVFTKICI

>peptide 2 (40 aa)
MVSELSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 3 (39 aa)
MVHLTRHSRHQHHKYLTNRGTGRPGTAAAAAAPPKLADY*

>peptide 4 (40 aa)
MVSELSTSRVMVFPVKVLTKICIPPRRRSTRWRVDSFWML*

Sequence

>CNT30603673
ATAGCAACATTTAATATATGCATCATTTTAAACATCAATTCACATAGGTAGAACATGTGATTCAACAAGAATGAGATGCAGATGAGCAAATTGAGCACAT
GTTTAGGTTCAAATCCAACTTATTCATAAAGCAAACTGCTGTAGCACAGGAAACTGTTCCATAAAACCAACACACAGGGACTCGATGGTCCATTTAACCA
GACACAGTAGACATCAGCACCACAAATACTTGACGAACAGAGGCACGGGACGACCAGGCACAGCAGCAGCCGCAGCAGCTCCACCGAAATTGGCTGATTA
CTGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAG
ATTAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACCTCCAGAGTGATGGTCT
TCCCAGTCAAGGTCTTAACGAAGATCTGCATACCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCG
GCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCA
GAGCTCTCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCATACCACCACGAAGGCGGAGCACAAGGTGGAGGGTGGACTCCT
TCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCGAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGA
TCTTAGCCTTGACATTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCATC