Detailed information on CNT30225636


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 4e-139

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-122

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30304287Hordeum vulgareTriticum aestivum69.5264.5390.41584forward
CNT30396890Hordeum vulgareTriticum turgidum53.337093.97448forward
CNT30458211Hordeum vulgareSaccharum spontaneum72.3871.9589.8608forward
CNT30143319Hordeum vulgareLolium perenne72.6269.2492.13610forward
CNT30363345Hordeum vulgareSorghum bicolor72.1466.5291.25606forward
CNT30595771Hordeum vulgareOryza meridionalis72.2657.4390.94607forward
CNT30150301Hordeum vulgareBrachypodium distachyon72.7443.2790.51611forward
CNT30583684Hordeum vulgareEchinochloa crusgalli72.6229.0689.84610forward

Expression of CNT30225636

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MSNARAITDHHGGGAPGEGWTPSGCCSQQGCDHPPAACQRR*

>peptide 2 (52 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICIPPRRRSTR*

>peptide 3 (53 aa)
MPSLSWILALTLSMVSDDSTSRVIVLPVRVFTKICMPPLRRRTRWRVDSFWML*

Sequence

>CNT30225636
GTAAATGAGTGCATGCAAATTTACCGGATGTTCGCTTATTCATTACTAAATAATACTGCTATACCAGCAACTGTTTAAACCAACACATGACTCGATAGTT
CATCAAACAAACACAATAGGACTGACACGAACGAGATAACAGTTCAATGATCCGCCGGACGAACGACCACCAGGATGTCCAACGCCAGGGCAATTACTGA
CCACCACCAGGATGTCCAACGCCAGGGCAATTACTGACCACCACGGAGGCGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGG
GTGCGACCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGG
TGTCAGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATACCACCACGAAGGCGGAGCACAAGGTGAAGGGTGGA
CTCCTTCTGAATGTTGTAGTCCGCGAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC
TGGATCTTGGCCTTGACATTGTCAATGGTGTCTGACGACTCCACCTCAAGAGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGCCACCCC
TAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAAGATGAGGCGCTG
CTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCC