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Detailed information on CNT30691368


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 4e-152

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-117

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673590Oryza sativaSetaria viridis26.2670.6591.8573forward
CNT30190365Oryza sativaSecale cereale30.9863.4191.27676forward
CNT30305431Oryza sativaTriticum aestivum30.5257.8689.79666forward
CNT30552841Oryza sativaOryza glaberrima43.6383.7399.47952reverse complement
CNT30242438Oryza sativaAvena sativa31.7674.5291.34693forward
CNT30669573Oryza sativaTriticum dicoccoides31.7670.6489.18693forward
CNT30458211Oryza sativaSaccharum spontaneum29.9377.2888.21653forward
CNT30143319Oryza sativaLolium perenne31.2177.391.92681forward
CNT30230519Oryza sativaAnanas comosus31.7669.7987.59693forward
CNT30652979Oryza sativaRosa chinensis31.6263.0186.67690forward
CNT30722254Oryza sativaTriticum spelta29.6598.7891.81647forward
CNT30364163Oryza sativaSorghum bicolor31.8575.7187.48695forward
CNT30595657Oryza sativaOryza meridionalis48.9100.3895.971067forward
CNT30150301Oryza sativaBrachypodium distachyon31.949.2989.37696forward
CNT30100520Oryza sativaOryza rufipogon45.4610096.67992forward
CNT30583253Oryza sativaEchinochloa crusgalli31.932.8588.36696forward
CNT30603673Oryza sativaOryza punctata42.7194.2490.56932forward
CNT30550711Oryza sativaOryza brachyantha32.13100.1491.01701forward

Expression of CNT30691368

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVIVLPVNVFTKICICKK*

>peptide 2 (52 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVSVLTKICMPPRRRRTR*

>peptide 3 (52 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVLTKICIPPRRRSTR*

>peptide 4 (62 aa)
MSKKNYPTDLHQTQNRYNILKPVFAPTHGTNNSIKSGTVDLNMLATRPTRWNTLQIAPITQA*

>peptide 5 (35 aa)
MEHATNRTNHSGMTSSTIPQQIYTDFPNRIIQQFI*

>peptide 6 (45 aa)
MSSQRSASARNNHQTDRVRTSTRLRTQQRIKQQTYSNRTYMYSKR*

Sequence

>CNT30691368
GAGAAATCAAGCAGCGAAGAAACAAAAAGATGTTACATGAGATGACAAATTAAAGCCCAATTACCTCGAATCATATATCAAATTGAATGTCGCAAAGATT
TCAACACACGCCTACAGCGTTCTGAAAAGAAAGCCCAAATGCTCATAGTGGCTCCAAATATAAATCAGGACAGCATAGTCCTTCCAGCATCACTTCCCTC
CAGAATAATCTTTTATATCCCATAGGCCATTGCAAAGCTCATTAAGATAAAAGTAAATGACGATTTAATAAGAATATGCAGCATTTTCAAACTTGCAACT
CAGATAAAACATCAACAGGAATGAGATGCAAATGAGCAAATTGAGCACATATTTAGGTTCAAATCCAACTTATTCATAAAGCATACTGCTGTCCCACAGG
AAACTGTTTCATAAAACTAACATATCATACGGACTCGATGGTCCATTAAACCAGACACAAGTAGACATCAGCACCACAAATACTTGACGAACAGAGGCTC
GGGACGACCAGGCACATCGGCAGCTCCACCAAACTGGCTGATTACTGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGT
AGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC
GTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCATACCACCACGAAGGCGGAGCACAAGG
TGAAGCGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGC
CCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGTGTCTTGACAAAGATCTG
CATGCCACCACGGAGGCGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAG
ATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCT
TGCCGGTCAATGTCTTCACAAAGATCTGCATCTGCAAGAAATAATCACCAAACAGATAGGGTAAGAACTAGCACAAGATTAAGGACACAACAACGGATCA
AACAGCAAACATATTCCAACAGAACATACATGTATTCAAAAAGATAGTAACAGGCACATCACACATGTATTCAGATAGGTAGTAACAGCACACGTATCCT
GAACTTCAGAAATAAGTAGAATGAACTAGTGGCAATAATCTTCACACAGATAGTAAAAAGAAATTACCACAATAGATTATATAGATGAACTACAGATTGT
AACATGATATTACTACAGATTGTAACATGATATTCTAATATAGTTCTTAGCATAAATTACTGGCAGATAGTAACATGAGATCATTATGACAGATATAGCG
ACAAGACTTCCTATTTACCATTGACAATTAATTAAAAGAGTTCATCATTATCTAATCTGTGAACATATGAAATCAAATCGAAACGCACAAGCTACATAAT
TGAACCATGTCTAAGAAGAACTACCCTACAGATCTACATCAAACACAAAACAGATATAACATATTAAAGCCTGTGTTTGCACCAACCCATGGCACCAATA
ACTCAATCAAGAGCGGAACAGTAGATCTGAACATGCTCGCAACAAGGCCTACAAGATGGAACACGCTACAAATCGCACCAATCACTCAGGCATGACTAGT
TCCACAATTCCCCAACAGATCTACACCGATTTCCCCAATCGAATCATCCAACAATTCATCTAACCGTAAAAATTCCCCCCAATCATCAGAACCAACATCC
AATCCCAAAACCTAACCACGATTCCACCTATCGAACCAACCGTGCCCAAATCACAACCATCAGATCTACAACCCCTAAACATCTCACGATAATCACATCG
ACAACCCTAACCACCAATCGGATCTAGCAACAAAACAACCTCACCCGTCCGAAATCGAATCGAAACGAAGCGAGGAGAGGAG