Detailed information on CNT30143198


BLAST search results

BLAST vs Swiss-Prot:
sp|P85413|RGP1_PHODC, E-value = 3e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692499Lolium perenneOryza sativa63.8629.2894.34159forward
CNT30375225Lolium perenneArabidopsis thaliana22.4914.9787.556forward
CNT30222738Lolium perenneHordeum vulgare40.1637.0490100forward
CNT30231412Lolium perenneAnanas comosus63.4544.2686.71158forward
CNT30716030Lolium perenneMalus domestica golden34.9434.1288.5187forward
CNT30683328Lolium perenneTriticum urartu63.4539.596.84158forward
CNT30721681Lolium perenneTriticum spelta20.0816.089850forward
CNT30361937Lolium perenneSorghum bicolor65.4613.1995.71163forward
CNT30595906Lolium perenneOryza meridionalis48.5956.8194.21121forward
CNT30327267Lolium perenneAsparagus officinalis47.7935.6390.76119forward

Expression of CNT30143198

Peptides detected in this lncRNA

>peptide 1 (82 aa)
AGGLGAEDAVDVVAVVELVVEALGDVDDLAGVAVLHDDEVVGLEEGAPHLEEVEGTDEPGTVTVPAIAAKIWISRSGRWWKQR

Sequence

>CNT30143198
GCAGGAGGCCTTGGGGCCGAGGATGCGGTTGATGTCGTTGCGGTTGTAGAGCTCGTAGTCGAAGCCCTCGGGGACGTTGATGACCTTGCTGGGGTCGCCG
TCCTGCACGATGATGAGGTGGTAGGGCTGGAAGAAGGGGCGCCACATCTCGAGGAAGTCGAGGGCACCGATGAGCCGGGCACAGTCACCGTCCCCGCCAT
TGCTGCCAAGATCTGGATCTCGCGCTCGGGGAGGTGGTGGAAGCAGAGG