Detailed information on CNT30595906


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8H8T0|RGP1_ORYSJ, E-value = 1e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222738Oryza meridionalisHordeum vulgare45.0735.5689.5896forward
CNT30143198Oryza meridionalisLolium perenne53.5245.7893.86114forward
CNT30716030Oryza meridionalisMalus domestica golden43.1936.0889.1392forward
CNT30683328Oryza meridionalisTriticum urartu51.6427.590110forward
CNT30361796Oryza meridionalisSorghum bicolor58.229.8395.16124forward
CNT30327267Oryza meridionalisAsparagus officinalis58.2237.1390.32124forward

Expression of CNT30595906

Peptides detected in this lncRNA

>peptide 1 (69 aa)
EGDAGGLGAEDPVDVVAVVELVVEALGDADGLGRVAVLHDDEVEEEVRCEVCVWVWVGGEEEAIYRAGAP

Sequence

>CNT30595906
TGAAGGAGATGCAGGAGGCCTTGGGGCCGAGGATCCGGTTGATGTCGTTGCGGTTGTAGAGCTCGTAGTCGAAGCCCTCGGGGACGCGGATGGTCTTGGT
CGGGTCGCCGTCCTGCACGATGATGAGGTGGAGGAGGAGGTGAGGTGTGAGGTGTGTGTGTGGGTTTGGGTGGGTGGGGAGGAGGAAGCGATTTATAGAG
CGGGAGCTCCGGG