Detailed information on CNT30375225


BLAST search results

BLAST vs Swiss-Prot:
sp|O22666|RGP3_ARATH, E-value = 2e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30143198Arabidopsis thalianaLolium perenne14.9722.4987.556forward
CNT30231412Arabidopsis thalianaAnanas comosus20.5921.5784.4277forward
CNT30361796Arabidopsis thalianaSorghum bicolor25.137.4586.1794forward
CNT30596003Arabidopsis thalianaOryza meridionalis18.7221.7487.1470forward
CNT30327267Arabidopsis thalianaAsparagus officinalis23.826.6584.2789forward

Expression of CNT30375225

Peptides detected in this lncRNA

>peptide 1 (74 aa)
EATTSRVLEGNARGLGTQDSIDVVPVVELVVKPYWNVDDFRRITILNNDQMILLKERSPHLKEVEVSNRRYHNV*

Sequence

>CNT30375225
CGAAGCAACGACAAGCAGAGTCCTTGAAGGAAATGCAAGAGGCCTTGGGACCCAAGATTCGATTGATGTCGTTCCTGTTGTAGAGCTCGTAGTCAAACCC
TACTGGAATGTTGATGACTTTCGAAGGATCACCATCTTGAACAATGATCAAATGATACTGCTCAAAGAAAGGTCGCCACATCTCAAGGAAGTCGAGGTTT
CGAATCGTAGGTATCACAATGTCTAGCTCATCTTTCAACATTGGCGTGGGTTTCACGGAAGAATACAATTGCGCCATTTGAAACGACAAGGAAGAAAGAG
TAGTTTATGATTAAGCAAAGACAAAGAGAGATGTACGATAACAAGGATGACTTCTTGGTATTTATAGAGATGAG