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Detailed information on CNT30628402


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549654Vigna unguiculataIpomoea triloba16.3538.3389.86138forward
CNT30514098Vigna unguiculataJuglans regia35.7876.2679.8302forward
CNT30727224Vigna unguiculataCorchorus capsularis39.6954.6581.19335forward
CNT30223457Vigna unguiculataHordeum vulgare7.3520.8187.162forward
CNT30393023Vigna unguiculataTriticum turgidum14.5728.1586.18123forward
CNT3084637Vigna unguiculataVigna radiata46.0933.897.69389forward
CNT30542059Vigna unguiculataBrassica napus29.1530.8379.27246forward
CNT30552975Vigna unguiculataOryza glaberrima14.5721.2187.8123forward
CNT30146554Vigna unguiculataMedicago truncatula21.2148.2585.47179forward
CNT30135940Vigna unguiculataLolium perenne14.6923.3183.87124forward
CNT30620034Vigna unguiculataCajanus cajan40.5232.5489.47342forward
CNT30706772Vigna unguiculataPrunus avium19.4346.7286.59164forward
CNT30579360Vigna unguiculataEchinochloa crusgalli17.7724.7184150forward
CNT30113763Vigna unguiculataFicus carica40.5230.8983.92342forward

Expression of CNT30628402

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLAPTETATKRPNAWAMEAEMSPAGVAAPLSVSLL*

>peptide 2 (35 aa)
TEASVKWYIQPEPNNDTLSNGGPGEKERDGERMHK*

Sequence

>CNT30628402
TGACAGAAGCATCAGTGAAATGGTACATTCAGCCAGAACCCAATAATGATACATTATCCAATGGTGGACCAGGTGAGAAAGAGAGAGACGGAGAGAGGAT
GCACAAATGATGATAATTTAACTTAAAAGGAGAACATGATCATCAACCATCCAACCAAAGATCAACCAACGGCCACCGATTCAACACGAAAGGAACAACC
CGCGAAAGTAGAATGAAGAAAAACACAAGGGAAAAAACATACACAGATCGAAGAGAAATTCAGTAATTGACAATTTTTTTTTTGCTTATTTTTGTGATTT
CTGGGTCTAGTAGTCAGTGGTTGGGAGCTGCTCGTGGGTGTGGCTGATGAAGACAACCTCGTAGATGACCCCAGCGAGCCCACCACCGATGAGAGGGCCG
ACCCAGCCACCACGGAGCCCAGGAGCTGGGCGATGATGTAGACGACACCGCGGAGGAAGGTGATGTTACCTCCGACGAAGGCGCCGAAGGTGACGGCGGG
GTTCACGTGACCTCCGGAGATGTTGGCGCCGACGGAGACGGCGACAAAAAGGCCGAATGCGTGGGCGATGGAGGCGGAGATGAGTCCGGCAGGTGTGGCG
GCGCCGTTGTCAGTGAGCTTGTTGTAGGCGATGCCGGAGCCTGAGCCGGCGAACACGAAGATGAGGGTGGAGATGAACTCAGCCAAAGCCGCCTTCAACG
TGTCGGGGTGAGTGGCCTCCTCGGGCCTTCCGACGGCGATGTTTCTGATCGGCATCTTCAATCGACGGTGGTGATGATTACGACTGGTGAAAGATGAAGT
GAACACCGAGATCACTCACTCAGATCACTCTCTGTTTCGCTGCC