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Detailed information on CNT30724786


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9TL30|RK12_NEPOL, E-value = 4e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3091771Lupinus angustifoliusSolanum tuberosum19.7123.3581.15191forward
CNT30233940Lupinus angustifoliusBrassica oleracea15.4832.1982.67150forward
CNT30310574Lupinus angustifoliusCamelina sativa16.3125.279.75158forward
CNT30207310Lupinus angustifoliusHelianthus annuus14.4528.2887.86140forward
CNT30355387Lupinus angustifoliusLactuca sativa23.1234.2581.25224forward
CNT30573129Lupinus angustifoliusVitis vinifera20.3380.4185.28197forward
CNT30323277Lupinus angustifoliusAsparagus officinalis9.838.6284.2195forward
CNT3036650Lupinus angustifoliusCucumis melo22.733.0887.73220forward

Expression of CNT30724786

Peptides detected in this lncRNA

>peptide 1 (67 aa)
HFRNQTPLHNKNFKQLFNCSCRIATNVSQSNYIVTLNHNDPVVLTRIQLYLSYIRLHQIQKYSLNIR*

>peptide 2 (37 aa)
MSVPSFSIFSGAETAAMGRRKVARWERLLELEKGNWR*

>peptide 3 (34 aa)
LISEIKLHFTTKTSNSYSIAVVGSQQMYHSLITL*

>peptide 4 (31 aa)
MEEMEEDRIRCFGCNLDKESMADILCSFFATR

Sequence

>CNT30724786
CTCATTTCAGAAATCAAACTCCACTTCACAACAAAAACTTCAAACAGTTATTCAATTGCAGTTGTAGGATCGCAACAAATGTATCACAGTCTAATTACAT
TGTAACATTGAATCACAATGATCCAGTTGTACTAACCCGAATACAATTATATTTGAGTTATATCAGACTGCACCAAATTCAAAAATATTCGTTGAACATA
AGATAATTTAGACTGCAATTGTCACATTCCTCATCATAATGCCACACCTAACATTCTTAAAAAAAAATACCTTTTCCATGTGACAATTTCAATTCAAAAC
GAATCCAAACATTAACAAAACACAATGACATTAAACTATACTACTGAACTAAACAAGCAAAAAAAGAAGAACATTATGACTTAAACAATAGCAATCTTAG
CACCAGCCTCTTCAAGCTGCTTCTTCGCATCTTCTGCCTCCTCCTTCGAAATTCCTTCTTTGAATTTCTTCGGCAATCCTTCAATCAAATCCTTCGCCTC
CTTAAGCGCTAAGCTTGTCAACGCTCTCACCGCCTTAATCACCGCGATTCTCGCGTTACTCGGAACTTCCTCAATAACCACATCAAACTCCGTCTTCTCC
TCCACAACAGGAGCGGCTTGAGATGTCAGTGCCGAGCTTTTCAATTTTCTCAGGGGCGGAGACGGCGGCGATGGGGCGGAGGAAGGTGGCGCGGTGGGAG
CGGTTGTTGGAGTTGGAGAAGGGAAATTGGAGGTAAAGTTTGGAGTGCGTAGGATAAGATGAGGGTGTAGGATAATAGGTGGAAAGAGAAGTGAAACGAG
GTGTTAGGGTTGATAGAGTAGAAGCCATTTTGTGATGAAGAGAATAGTTGAGAGATGAGTTGAGTGAAGAAATGGAAGAAATGGAAGAAGATAGGATAAG
GTGCTTTGGGTGTAATTTGGATAAGGAAAGTATGGCAGATATTTTATGCTCATTTTTTGCAACAAGGTT