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Detailed information on CNT3091771


BLAST search results

BLAST vs Swiss-Prot:
sp|P24929|RK12_TOBAC, E-value = 6e-80

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30405621Solanum tuberosumBeta vulgaris27.1443.6181.98222forward
CNT30508927Solanum tuberosumSolanum lycopersicum58.0758.2895.58475forward
CNT30724786Solanum tuberosumLupinus angustifolius23.3519.7181.15191forward

Expression of CNT3091771

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MRLKLQAYPEGTLRVSGHRRGLSWRFHLRAGLPSPVLRRRREGGRKWLGGGGVWECEWGVLGFW*

>peptide 2 (40 aa)
MTTSNSVFSSTTGGASAAAPPGAATTAAGAKDAAETPSLS*

>peptide 3 (30 aa)
MKLKRAWSLRLIEKEERENEGQLWIMWKPL*

Sequence

>CNT3091771
ACCATAAGCAAAAAGGGGTGAATAATCTTGATTTTAGAAAATTGGGTACAACTATCTAACAACTGAATTCTCTTACAAAAACACAAAAAACTTACAGTAA
TTTGCCCAGATAATCAAAACCAAATAAGAATGAACATTTACCGTAAACTCATTTAAGCAATAGAAACTTTAGCACCAGCTTCTTCTAGCTGTTTCTTAGC
ATCTTCAGCCTCATCCTTGGAAACACCCTCCTTAAATTTCTTAGCATCTTCAGCCTCATCCTTGGAAACACCCTCCTTAAATTTCTTAGGCAATCCTTCA
ATCAATTCCTTCGCCTCTTTCAAAGCCAAACTTGTTAAAGCCCTAACAGCCTTAATAGTCGCAATTCTAGCATTACTCGGTACTTCATCGATGACTACAT
CAAATTCCGTCTTCTCCTCAACCACAGGTGGAGCATCTGCGGCTGCGCCACCAGGGGCAGCGACGACGGCAGCGGGAGCGAAGGATGCGGCTGAAACTCC
AAGCTTATCCTGAAGGTACTCTACGAGTTTCTGGGCATCGGCGAGGGTTAAGTTGGAGATTTCATCTCCGAGCTGGACTACCTTCTCCGGTGCTTCGACG
GCGGCGAGAGGGCGGACGAAAGTGGCTCGGCGGTGGTGGAGTTTGGGAGTGCGAATGGGGAGTTCTAGGGTTTTGGTAGGGAATGAAATTGAAGCGTGCG
TGGAGCTTACGGTTGATTGAGAAAGAGGAGAGGGAGAACGAAGGGCAATTGTGGATAATGTGGAAGCCATTGTAGCAGAGCTAAAGAGAAATTGAGGAGG
GGAGAAGAGAGTGAAAGA