Detailed information on CNT30573129


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1ACG9|RK12_CHAVU, E-value = 1e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30233940Vitis viniferaBrassica oleracea21.2211.1688.4652forward
CNT30207310Vitis viniferaHelianthus annuus52.6526.0681.4129forward
CNT30355387Vitis viniferaLactuca sativa52.2419.5784.38128forward
CNT30724786Vitis viniferaLupinus angustifolius54.6913.8384.33134forward

Expression of CNT30573129

Peptides detected in this lncRNA

>peptide 1 (80 aa)
SGFFKLLLRFFSFLLRNAFLELLRQAFNQLLRLLQRQARERSHGLNRRNPRVAWNVLNHDIELRLLFHHRGSRDSKLVLEP

>peptide 2 (80 aa)
PASSSCFFASSASSFETPSLNFLGKPSINSFASFNAKLVSALTALIVAILALLGTSSIMTSNSVFSSTTAAAETPSLSWSQ

Sequence

>CNT30573129
TCCGGCTTCTTCAAGCTGCTTCTTCGCTTCTTCAGCTTCCTCCTTCGAAACGCCTTCCTTGAACTTCTTAGGCAAGCCTTCAATCAACTCCTTCGCCTCC
TTCAACGCCAAGCTCGTGAGCGCTCTCACGGCCTTAATCGTCGCAATCCTCGCGTTGCTTGGAACGTCCTCAATCATGACATCGAACTCCGTCTTCTCTT
CCACCACCGCGGCAGCAGAGACTCCAAGCTTGTCCTGGAGCCAGT