Detailed information on CNT30323277


BLAST search results

BLAST vs Swiss-Prot:
sp|O22386|RK12_ORYSJ, E-value = 2e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523072Asparagus officinalisSetaria italica20.7320.1688.2451forward
CNT30363319Asparagus officinalisSorghum bicolor22.7610.5987.556forward
CNT30355387Asparagus officinalisLactuca sativa42.2815.982.69104forward
CNT3036650Asparagus officinalisCucumis melo72.7626.9279.33179forward
CNT30724786Asparagus officinalisLupinus angustifolius38.629.884.2195forward

Expression of CNT30323277

Peptides detected in this lncRNA

>peptide 1 (80 aa)
TNLAIKASPQTMDILAPTPSSCFLASSASSFEIPSLNFFGSPSIKSLASFSARFVNALTTLIVAILALLGTSPITTSNSVL

>peptide 2 (31 aa)
DKPSHQSLSSDNGYLGPNPLQLLLSVLGLLL*

Sequence

>CNT30323277
TGACAAACCTAGCCATCAAAGCCTCTCCTCAGACAATGGATATCTTGGCCCCAACCCCCTCCAGCTGCTTCTTAGCGTCCTCGGCCTCCTCCTTTGAAAT
CCCCTCCCTGAATTTCTTCGGCAGCCCCTCGATCAAATCCTTGGCCTCCTTCAGCGCCAGGTTCGTTAATGCCCTAACCACCTTAATCGTGGCAATCCTA
GCATTGCTCGGGACCTCTCCAATAACCACATCGAACTCCGTCTTAT