Detailed information on CNT30207310


BLAST search results

BLAST vs Swiss-Prot:
sp|P36688|RK12_NICSY, E-value = 3e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3091118Helianthus annuusSolanum tuberosum51.9246.8179.77257forward
CNT30508927Helianthus annuusSolanum lycopersicum30.118.2882.55149forward
CNT30355387Helianthus annuusLactuca sativa30.7123.2486.18152forward
CNT30573129Helianthus annuusVitis vinifera30.9162.4581.7153forward
CNT3036650Helianthus annuusCucumis melo30.122.4185.23149forward
CNT30724786Helianthus annuusLupinus angustifolius28.2814.4587.86140forward

Expression of CNT30207310

Peptides detected in this lncRNA

>peptide 1 (89 aa)
ASSASSLLTPSLNFFGNPSINSLASLSAKLVKPLTALIVAILALLGTSSITTSNSVFSSTASTASAPPPPGAATTAAGANDAAVTPSLS*

Sequence

>CNT30207310
GCATCTTCAGCTTCATCTCTACTCACACCTTCCTTAAACTTCTTCGGTAATCCTTCAATCAACTCCTTAGCCTCCTTAAGCGCTAAACTCGTCAAGCCTC
TAACCGCTTTAATCGTCGCAATTCTCGCATTACTCGGAACATCATCAATAACAACGTCAAACTCCGTCTTCTCCTCCACCGCCTCCACAGCGTCAGCGCC
ACCGCCGCCAGGTGCGGCGACGACGGCGGCCGGAGCGAACGATGCGGCGGTGACGCCGAGCTTGTCCTGAAGGTATTCTACTAAGGATTGTGCTTGTGCT
AGGGTTAGGTTTGAGATTTCGTCGCCTAGGGTTACGACTTTGTCGTCGGTGGCGGTTGAATTTGAGAGCGTGTTTGGTGGAGAAGAGTGGTGGTGGTGTG
GTGGTGGTAGTGAGGTGTGGAGTGCGTAGGATAACTGTGGAGAGAGATGAAGACGCCATTGGAGCAGGAGAGGTTGCAGAGAGTGAAGAAGAAAG