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Detailed information on CNT30670119


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693976Triticum dicoccoidesOryza sativa36.1245.0980.28436forward
CNT30193534Triticum dicoccoidesSecale cereale48.810095.76589forward
CNT30306856Triticum dicoccoidesTriticum aestivum62.8810099.6759forward
CNT30226224Triticum dicoccoidesHordeum vulgare29.2598.8896.03353forward
CNT30401002Triticum dicoccoidesTriticum turgidum18.39100100222forward
CNT30443328Triticum dicoccoidesAegilops tauschii51.8699.8497.6626forward
CNT30688632Triticum dicoccoidesTriticum urartu50.21100.596.2606forward

Expression of CNT30670119

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MSGVNCRPLCATVTSLSELKKSSRPRNPVRFLSAYVQ

>peptide 2 (34 aa)
MNFALVVELQRKDQPQNLSWTAIHFPREPMPWSH*

>peptide 3 (71 aa)
MFRSVGFGFTDVVIAGVWAAGVELCVGIPTVPRFTCGEAPLTGACEVPPNGLALFLPLNQSVDRFAVVEPA*

>peptide 4 (37 aa)
LGNLQLKNRFLASSPVIFPSRSLSTLINTIIYFLTSA*

>peptide 5 (30 aa)
MLALSGPGVLGMLLNWFCLGAGWFGGTWPV*

Sequence

>CNT30670119
CTCTTGGCAACCTCCAACTTAAAAACAGATTCCTTGCCTCTTCACCAGTGATCTTCCCATCTCGATCTCTGTCTACCTTAATAAATACAATCATATATTT
CCTGACATCTGCTTGAGTGATCTTGGGCCATGGGGCCTGAAACTGTTTTTGATTTGTAGGAATTTGTCCACCAGGGATGTTAGCACTCAGTGGTCCTGGA
GTGCTCGGTATGCTATTAAACTGGTTCTGCTTAGGAGCTGGCTGGTTTGGTGGCACCTGGCCAGTATGAGAAAGCAACGATGATATACCCTGCACAGGAC
CAGGCGGCATTGGCTTAGGGGGGTGATGAGGTCCAGCAGCTGGGCCAAGGGCTGTAGAACCATGCAAGCCATTTGAAACATGGGGGGAAGATGAATTTTG
CGTTGGTTGTGGAGTTGCAGAGAAAGGATCAACCCCAAAACTTGAGTTGGACGGCGATCCATTTCCCAAGGGAACCAATGCCTTGGAGTCATTAACAGCT
GGTTGTGAAGACAGAATGTTTAGATCTGTTGGATTTGGCTTTACAGATGTCGTAATAGCCGGTGTCTGGGCTGCAGGAGTTGAACTCTGTGTTGGTATTC
CCACGGTGCCAAGGTTCACCTGTGGAGAAGCACCTCTAACTGGAGCTTGTGAAGTACCTCCCAATGGACTTGCACTTTTCTTGCCACTGAACCAATCGGT
GGATAGATTTGCCGTCGTTGAACCAGCCTGATTTAGCCCACTTAGACCACCTCCTACGGGTGGCCTTGGCGCAATTCCCTGAGCAGGGGGGATGTTTGCA
TTTGGAGGTTGTGGCGGCCTAACAGGATGACCCTGTTGGGGTACTTGTGGGGTGTTTGCACTTGGAGGTTGTGGCGGCCTAACAAGATTACCCGATTGGG
GTACTTGTAGGTTCAATGATGATCCAGGAGGGCCCTGTGATCCATTTACAACTGGTGTCTGTTGACGAGGACCTAATGCCTGAGTCGGCTGCGGGGGGCT
AGCGACACTATTTGGCTGAGGAGCTGCGGTTGGGATATTTATACGGGGAGCAGGAATTTTTGCAGCGGCGGGACCGAATAATGCTGACTTAACAATGTCC
GGTGTCAACTGTCGGCCACTCTGTGCGACTGTCACTAGTTTAAGCGAGTTGAAAAAATCTTCACGCCCAAGAAACCCAGTCCGGTTTTTATCAGCATATG
TCCAGAT