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Detailed information on CNT30306856


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693976Triticum aestivumOryza sativa34.6527.282.13263forward
CNT30670119Triticum aestivumTriticum dicoccoides10062.8899.6759forward
CNT30688632Triticum aestivumTriticum urartu79.84100.596.37606forward

Expression of CNT30306856

Peptides detected in this lncRNA

>peptide 1 (97 aa)
KLELDGDPFPKGTNALESLTAGCEDRMFRSVGFGFTDVVIAGVWAAGVELCVGIPTVPRFTCGEAPLTGACEVPPNGLALFLPLNQSVDRFAVVEPA*

>peptide 2 (32 aa)
MSGVNCRPLCATVTSLSELKKSSRPRNPVRFLS

Sequence

>CNT30306856
CAAAACTTGAGTTGGACGGCGATCCATTTCCCAAGGGAACCAATGCCTTGGAGTCATTAACAGCTGGTTGTGAAGACAGAATGTTTAGATCTGTTGGATT
TGGCTTTACAGATGTCGTAATAGCCGGTGTCTGGGCTGCAGGAGTTGAACTCTGTGTTGGTATTCCCACGGTACCAAGGTTCACCTGTGGAGAAGCACCT
CTAACTGGAGCTTGTGAAGTACCTCCCAATGGACTTGCACTTTTCTTGCCACTGAACCAATCGGTGGATAGATTTGCCGTCGTTGAACCAGCCTGATTTA
GCCCACTTAGACCACCTCCTACGGGTGGCCTTGGCGCAATTCCCTGAGCAGGGGGGATGTTTGCATTTGGAGGTTGTGGCGGTCTAACAGGATGACCCGG
TTGGGGTACTTGTGGGGTGTTTGCACTTGGAGGTTGTGGCGGCCTAACAAGATTACCCGATTGGGGTACTTGTAGGTTCAATGATGATCCAGGAGGGCCC
TGTGATCCATTTACAACTGGTGTCTGTTGACGAGGACCTAATGCCTGAGTCGGCTGCGGGGGGCTAGCGACACTATTTGGCTGAGGAGCTGCGGTTGGGA
TATTTATACGGGGAGCAGGAATTTTTGCAGCGGCGGGACCGAATAATGCTGACTTAACAATGTCCGGTGTCAACTGTCGGCCACTCTGTGCGACTGTCAC
TAGTTTAAGCGAGTTGAAAAAATCTTCACGCCCAAGAAACCCAGTCCGGTTTTTATCAG