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Detailed information on CNT30443328


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693976Aegilops tauschiiOryza sativa21.2113.7586.47133forward
CNT30193534Aegilops tauschiiSecale cereale90.7596.696.49569forward
CNT30307995Aegilops tauschiiTriticum aestivum97.6188.8299.84612forward
CNT30226224Aegilops tauschiiHordeum vulgare55.8298.0496.86350forward
CNT30401002Aegilops tauschiiTriticum turgidum35.4110096.85222forward
CNT30670119Aegilops tauschiiTriticum dicoccoides99.8451.8697.6626forward
CNT30688632Aegilops tauschiiTriticum urartu96.65100.596.04606forward

Expression of CNT30443328

Peptides detected in this lncRNA

>peptide 1 (57 aa)
AGVWAAGVELCVGIPTVPRFTCGEAPLTGACEVPPNGLALFLPLNQSVDRFAVVEPA*

>peptide 2 (29 aa)
MSGVNCRPLCATVTSLSELKKSSRPRNPVR

>peptide 3 (30 aa)
MTRLGYLWGVCTWRLWRPNKITRLGYLWVQ*

Sequence

>CNT30443328
GCCGGTGTCTGGGCTGCAGGAGTTGAACTCTGTGTTGGTATTCCCACGGTGCCAAGGTTCACCTGTGGAGAAGCACCTCTAACTGGAGCTTGCGAAGTAC
CTCCCAATGGACTTGCACTTTTCTTGCCACTGAACCAATCGGTGGATAGATTTGCCGTCGTTGAACCAGCCTGATTTAGCCCACTTAGACCACCTCCTAC
GGGTGGCCTTGGCGCGATTCCCTGAGCAGGGGGAATGTTTGCATTTGGAGGTTGTGGCGGCCTAACAGGATGACCCGGTTGGGGTACTTGTGGGGTGTTT
GCACTTGGAGGTTGTGGCGGCCTAACAAGATTACCCGGTTGGGGTACTTGTGGGTTCAATGATGATCCAGGAGGGCCCTGTGATCCATTTACAACTGGAG
TGTGTTGACGAGGACCTAATGCCTGAGTGGGCTGTGGGGGGCTAGCGACACTGTTTGTCTGAGGAGCTGCGGTTGGGATATTTATACGGGGAGCAGGAAT
TTTTGCAGCAGCGGGACCGAATAATGCTGACTTAACAATGTCTGGTGTCAACTGTCGGCCACTCTGTGCAACTGTCACTAGTTTAAGCGAGTTGAAAAAA
TCTTCACGCCCAAGAAACCCAGTCCGA