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Detailed information on CNT30693976


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193534Oryza sativaSecale cereale13.7522.5886.47133forward
CNT30306856Oryza sativaTriticum aestivum27.234.6582.13263forward
CNT30443328Oryza sativaAegilops tauschii13.7521.2186.47133forward
CNT30670119Oryza sativaTriticum dicoccoides45.0936.1280.28436forward
CNT30688575Oryza sativaTriticum urartu13.7526.5586.47133forward

Expression of CNT30693976

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNLALLVELQQKGRHQMLRPMIIHSPKAPMPWSH*

>peptide 2 (30 aa)
MELNWFCFGAGCEGSDATPCMGPVCNGLGG*

Sequence

>CNT30693976
GTGCCTGCGCCTATAATCACAAACAATGGTAACTAAAATGCATAGATCACACAGATCATGGGCCATGGCAGCAGAGCCCGCAGAAGTTAGAATGGGAAAA
AAAAAGTGATGTACCTCTTGGAAGCCTCCAACTTAAGAACAGATTCCTAGCCTCTTCACCAGTAATTTTTCCATCTCGGTCCCTGTCTACCTTAATAAAT
ACAATCATATATTTCCTTACATCTGCTTGAGTGATTTTCGGCCATGGAGCTTGAGACTGGTTCGTGTTTGAAGGAATTTGTCCACCAGGAAAACTACCCA
TAGGTGCTGGAGCGCTTGGCATGGAATTAAACTGGTTTTGCTTTGGAGCTGGCTGTGAAGGGAGTGATGCTACACCCTGCATGGGACCAGTCTGCAATGG
TTTAGGGGGGTGATGAGGTCCAGCGGATGGTCCAAGAGCATTAGCACTAGGCAAACTATTTGAAACCACAGGGGGGGAAGATGAATCTTGCTTTGCTTGT
GGAGTTGCAGCAAAAGGGTCGACACCAAATGTTGAGGCCGATGATAATCCATTCCCCAAAGGCACCAATGCCTTGGAGTCATTAGCAGCTGGCGGTGAAG
ACAGAAGGTTTAAATCTGCTGAATTCGCCTTTACAGATGTTGTACTGGCTGGAGTGTGAGAGCCATAGCCTGCTATAGGAGTTGAACTCTGTGTTGGTAT
TCCCGCGGTAGCAAGGTTGACCTGTGGAGAAACACCTCTGGTTGGAGTTTGTGAAGTTACACCCAATGGACTTGCGCTTTTCTTGCCATTAAACCAATCA
GTTGATAGACCTGTTGTTGCTGGAACAGTATGGTTTGGAACACCACCTGCGGGCGCCCTTGGAGCAATTGCCTGAGCAGGAGTGTTTGCAATTGACGCTT
GTGGTGGCCTGACAACATTACCAGGTTGAAGGACCTGTGGATTTAGTGATGTGCTAAGGGGGCCCTG