Detailed information on CNT30688632


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193534Triticum urartuSecale cereale94.0396.2694.53567forward
CNT30306856Triticum urartuTriticum aestivum100.579.8496.37606forward
CNT30226224Triticum urartuHordeum vulgare59.54100.5692.76359forward
CNT30401002Triticum urartuTriticum turgidum37.81102.792.54228forward
CNT30443328Triticum urartuAegilops tauschii100.596.6596.04606forward
CNT30670119Triticum urartuTriticum dicoccoides100.550.2196.2606forward

Expression of CNT30688632

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MTWLGYLWGVCTRLWRPNKITRLGYLWIQ*

>peptide 2 (54 aa)
WAAGVELCVGIPTVPRFTCGEAPLTGACEVPPNGLALFLPLNQSVDRFAVVEPV*

>peptide 3 (30 aa)
MMIQDQEGPVIHLQLESVDEDLMPESAAGG*

Sequence

>CNT30688632
CTGGGCTGCAGGAGTTGAACTCTGTGTTGGTATTCCCACGGTGCCAAGGTTCACCTGTGGAGAAGCACCTCTAACTGGAGCTTGCGAAGTACCTCCCAAT
GGACTTGCACTTTTCTTGCCACTGAACCAATCGGTGGATAGATTTGCCGTCGTTGAACCAGTCTGATTTAGCCCACTTAGACCACCTCCTACAGGTGGCC
TCGGCGCAATTCCCTGAGCAGGGGGGATGTTTGCATTTGGAGGTTGTGGCGGTCTAACAGGATGACCTGGTTGGGGTACTTGTGGGGTGTTTGCACGAGG
TTGTGGCGGCCTAACAAGATTACCCGGTTGGGGTACTTGTGGATTCAATGATGATCCAGGACCAGGAGGGCCCTGTGATCCATTTACAACTGGAGTCTGT
TGACGAGGACCTAATGCCTGAGTCGGCTGCGGGGGGCTAGTGACACTATTTGGCTGAGGAGCTGCGGTTGGGATATTTATACGGGGAGCAGGAATTTTTG
CAGCAGCGGGACCGAATAATGCTGACTTAACAATGTCCGGTGTCAACTGTCGGCCACTCTGTGCAACTGTCACTAGTTTAAGCGAGTTGAAAAAATCTTC
ACG