Detailed information on CNT30401002


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30194398Triticum turgidumSecale cereale10057.9696.4222forward
CNT30306935Triticum turgidumTriticum aestivum10044.49100222forward
CNT30226224Triticum turgidumHordeum vulgare10062.1895.5222forward
CNT30443328Triticum turgidumAegilops tauschii10035.4196.85222forward
CNT30670119Triticum turgidumTriticum dicoccoides10018.39100222forward
CNT30688632Triticum turgidumTriticum urartu102.737.8192.54228forward

Expression of CNT30401002

Peptides detected in this lncRNA

>peptide 1 (48 aa)
PWRNSLSRGDVCIWRLWRPNRMTLLGYLWGVCTWRLWRPNKITRLGYL*

Sequence

>CNT30401002
GCCTTGGCGCAATTCCCTGAGCAGGGGGGATGTTTGCATTTGGAGGTTGTGGCGGCCTAACAGGATGACCCTGTTGGGGTACTTGTGGGGTGTTTGCACT
TGGAGGTTGTGGCGGCCTAACAAGATTACCCGATTGGGGTACTTGTAGGTTCAATGATGATCCAGGAGGGCCCTGTGATCCATTTACAACTGGTGTCTGT
TGACGAGGACCTAATGCCTGAG