Detailed information on CNT30226224


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30193534Hordeum vulgareSecale cereale96.0858.2395.92343forward
CNT30307995Hordeum vulgareTriticum aestivum98.0450.897.14350forward
CNT30401002Hordeum vulgareTriticum turgidum62.1810095.5222forward
CNT30443328Hordeum vulgareAegilops tauschii98.0455.8296.86350forward
CNT30670119Hordeum vulgareTriticum dicoccoides98.8829.2596.03353forward
CNT30688632Hordeum vulgareTriticum urartu100.5659.5492.76359forward

Expression of CNT30226224

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MTRLGYLWGVCTWRLWRPNRMTLLGYLWVQ*

Sequence

>CNT30226224
GCCCAATGGACTTGCACTTTTCTTGCCACTGAACCAATCGGTGGATAGATTTGCCGTCGTTGAACCAGCCTGATTTAGCCCACTTAGACCACCTCCTACG
GGTGGCCTTGGCGCAATTCCCTGAGCAGGGGGGGTGTTTGCATTTGGAGGTTGTGGCGGCCTAACAGGATGACCCGGTTGGGGTACTTGTGGGGTGTTTG
CACTTGGAGGTTGTGGCGGCCTAACAGGATGACCCTGTTGGGGTATTTGTGGGTTCAATGATGATCCAGGAGGGCCCTGTGATCCATTTACAACTGGACT
CTGTTGACGAGGACCTAATGCCTGAGTGGGCTGTTGGGGGCTAGCAACACTATTCGT