Detailed information on CNT30651738


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518558Rosa chinensisJuglans regia38.5935.5683.65208forward
CNT30698380Rosa chinensisQuercus lobata49.7267.8580.97268forward
CNT3043744Rosa chinensisPrunus dulcis71.9998.9887.11388forward
CNT30565212Rosa chinensisActinidia chinensis30.0619.6885.8162forward
CNT30126429Rosa chinensisCorymbia citriodora27.2728.7784.35147forward
CNT3029382Rosa chinensisTheobroma cacao27.2725.7480.95147forward
CNT3024994Rosa chinensisPopulus trichocarpa63.4556.2582.16342forward
CNT3038944Rosa chinensisCucumis melo36.9251.9681.41199forward

Expression of CNT30651738

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MMYPSLPHVSSATDRTQPAQEHGALYHHLLRPLASFLVEEVDEVGHLVEEVVMVSHSREWELYQQGHLQI*

>peptide 2 (33 aa)
SISPIMLLLALDTFDDVDIKDDVSFFASRFISD*

Sequence

>CNT30651738
TCTCAATCTCCCCAATCATGTTGCTCCTTGCACTAGATACATTCGATGATGTAGATATTAAAGATGATGTATCCTTCTTTGCCTCACGTTTCATCAGCGA
CTGATAGAACTCAACCAGCTCAGGAGCACGGTGCACTTTATCACCACCTCCTGCGCCCCTTGGCAAGCTTCCTGGTGGAGGAGGTGGACGAGGTGGGCCA
CCTGGTGGAGGAGGTGGTAATGGTATCCCACTCGAGGGAGTGGGAGTTGTACCAACAGGGGCACCTCCAGATTTAGGAGGTGGCCGAGGCACCCTAGGAG
GTCTCTTCTCAATTTGAGCAAGTTTCATCTTGCTTATTTCTTGAGGATCAAAAGCCTTACCACCATCCGCTTGGTTGCTTGAATCACCCGAAATAACTGC
CTTCTCCTTTATAAGGGTAAGTTTGGGTGGCAAACTAACTATTCTATCCTTGTCAGCTTTTGTTCTAGGCTCGTAGCTGAAACTTACATTTGATTTATCA
CCAAACTTCTCTGCTCTTGCCTGATCAGCCCTTTCCTTA