Detailed information on CNT30644675


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30507014Cannabis sativaNicotiana attenuata23.4330.188.1793reverse complement
CNT3093739Cannabis sativaSolanum tuberosum21.4127.9688.2485reverse complement
CNT30508652Cannabis sativaSolanum lycopersicum15.6220.3991.9462reverse complement
CNT30662869Cannabis sativaTriticum dicoccoides16.6221.7890.9166reverse complement
CNT30612441Cannabis sativaArabis alpina21.9128.2589.6687forward
CNT30653670Cannabis sativaRosa chinensis37.5336.2585.23149reverse complement
CNT30625980Cannabis sativaDaucus carota19.6525.5787.1878reverse complement
CNT3030049Cannabis sativaTheobroma cacao21.1627.3694.0584reverse complement

Expression of CNT30644675

Peptides detected in this lncRNA

>peptide 1 (43 aa)
KLYSTEYIHILKTKNSGSVKRITSIDILKSKKRWSDYGQPSEP*

Sequence

>CNT30644675
AAAGTTATATAGCACGGAATATATTCACATCTTAAAAACAAAAAATTCAGGTTCTGTGAAAAGAATAACTTCTATTGATATTTTGAAATCCAAAAAGAGA
TGGTCCGATTATGGTCAGCCCAGTGAACCATGATGGGCCCAGGTAGCACCGGCCCGTTATCCTTCCACTGCCGAGAGCGGGAAGTGTTCGCTGCTCTGTG
AAGCCAGCCTCACGCATTACCCTCCACTCTAGGAGCCCAGTGGGCCAGACTTTCGTCCAAACCACAGAGCCCAACTCCCAGCTTGGAACGGGCAGGCCAG
TAAGTAGCTAACACTGGATCCGGCCCAATGGGCTAACCAAATGTCCCATCTCCCACATGCCCTCACTTGAGTTACAGGCTCACGTTACTAGGCCCGG