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Detailed information on CNT30507014


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501219Nicotiana attenuataCoffea canephora31.7230.9189.898reverse complement
CNT30404033Nicotiana attenuataBeta vulgaris28.1628.1687.3687forward
CNT30612441Nicotiana attenuataArabis alpina28.4828.5785.2388reverse complement
CNT30716661Nicotiana attenuataMalus domestica golden28.828.7185.3989forward
CNT30644675Nicotiana attenuataCannabis sativa30.123.4388.1793reverse complement

Expression of CNT30507014

Peptides detected in this lncRNA

>peptide 1 (30 aa)
PSLVTCASDPSEGNSVVGCWIVFEGWGSGG*

Sequence

>CNT30507014
GCCGAGCCTTGTAACATGCGCTTCTGACCCAAGTGAGGGCAATAGTGTGGTGGGATGTTGGATTGTTTTTGAAGGCTGGGGTTCTGGTGGCTAATGTCTG
ACCTGTCCTATCCAAGCTTAGAGTTGAGTCATTTGGCCCAAACGTAAGTATGGGCTGCTTGGCTCCTAGAGTGGGGCGGACTGCGTGAGGCTGGTTTTAC
AGAGCAACGAACAGTTCCCGCTCCGTGCAGTGGAAGGATAACGGGCCGGTGCTCTCCCAGTCATCTCCAATTTTCTTCTTTTGTCTCATTTCTTGAGTCC
ATTACTTCA