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Detailed information on CNT30639255


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710396Nymphaea colorataGlycine max37.2927.6189.63135forward
CNT3094391Nymphaea colorataSolanum tuberosum27.6222.8885100forward
CNT30299532Nymphaea colorataTriticum aestivum26.2418.6383.1695forward
CNT30145708Nymphaea colorataMedicago truncatula27.0712.7385.7198forward
CNT30249161Nymphaea colorataAvena sativa36.1927.9380.92131forward
CNT30411270Nymphaea colorataPapaver somniferum27.6217.8387100forward
CNT30570681Nymphaea colorataVitis vinifera37.029.886.57134forward
CNT30499040Nymphaea colorataDigitaria exilis28.7315.2984.62104forward
CNT30724196Nymphaea colorataLupinus angustifolius28.7312.587.5104forward

Expression of CNT30639255

Peptides detected in this lncRNA

>peptide 1 (80 aa)
LLRVNTILGMKVLHLPIRKDPVKLVVDLVLGPQPGAQGQALLLPRKLQQRQGSAICGRRRMKQRACLGAGCGLHCWSSMP*

Sequence

>CNT30639255
ACCTTCTCAGGGTAAACACCATCCTTGGGATGAAGGTACTGCACCTCCCCATTAGGAAAGACCCTGTAAAATTGGTAGTTGATCTTGTACTTGGACCTCA
GCCTGGTGCCCAAGGCCAAGCACTGCTCCTTCCTCGCAAGCTTCAACAGCGGCAGGGGTCTGCAATTTGCGGCCGGAGAAGGATGAAGCAGAGAGCTTGC
TTGGGAGCAGGGTGCGGACTGCATTGCTGGAGTTCGATGCCGTGATGGCAGGGGTGAAGAGGGAAGCGTGGGTTGCCATGGCCATGAAATGCTGCGGTGG
TGCGCTGCTGCTGGTAGAGGGCGGAATATGAGTTGGGGAGGGGAAGGAGAAGAAGGAGAAGG