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Detailed information on CNT30145708


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 8e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639255Medicago truncatulaNymphaea colorata12.7327.0785.7198forward
CNT30525887Medicago truncatulaPhaseolus vulgaris16.2333.4283.2125forward
CNT3094391Medicago truncatulaSolanum tuberosum18.1832.0486.43140forward
CNT30651207Medicago truncatulaRosa chinensis26.3629.9984.73203forward
CNT30570681Medicago truncatulaVitis vinifera24.1613.6183.87186forward
CNT30113105Medicago truncatulaFicus carica26.125.1283.58201forward
CNT30724196Medicago truncatulaLupinus angustifolius30.5228.2589.36235forward

Expression of CNT30145708

Peptides detected in this lncRNA

>peptide 1 (52 aa)
KYVQQNKTVIKVNTCKLFSICHINKCDNISTCITYPIKQALSILTHQKVAYQ*

Sequence

>CNT30145708
AAAATATGTTCAACAAAACAAAACAGTCATAAAAGTAAATACATGTAAATTGTTTAGCATTTGTCACATAAATAAATGTGATAATATAAGTACATGCATT
ACATACCCAATTAAGCAAGCATTATCAATCCTTACACATCAAAAGGTTGCTTACCAGTAAATTTAACCTCAATTGGGCTAACATTCTTCCCAATAGACCT
GAAATTCTGACCAACCCCTTGACGACCAGGGTTAACCTTCTCAGGGTACACACCATCCTTAGGATGCAAATATTGAACCTCACCATTAGGAAAAACCCTG
TAAAACTGATACTTAATCTTGTACTTAGACCTTAATCTATTTCCTAAAGCCAAACACTGTTCTTTCCTTGCTAACTTAAGAAGGTGACTCCCATGTGATC
ACATAGAATTCTTCAACTTGTGCCTTACGTAACAATCCACCAGTGCTTCCTCCAAAGATTGGTGAAGGTGTGTTTGGGTCTAGTTCAGGTGGAGTAAAAC
CAACTGGTGCAGCAGGAGCTTCTTCTTTTGTTGTAACTGATGCTGCTTCTGTTTTCTCATCTGCAGCTGAGATTTTTGTTGTTTTTGTTGTGAACTTGAT
GGGTTTGAGAGAGATGAAGGATAAAGTTGATGGTTGTTTCCATGGTTTAGGGCTTGAAAGAGGTGGAGTGAAGAGAGAGGCTTGAGTTGCCATTGCCATG
TTGTTGATGAATGTTGAAGAAGAAGAAGAAGAATGATGCTTATTTGTGTGAGTGAGAGTGAATGATGAAA