Detailed information on CNT30299532


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 9e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695553Triticum aestivumOryza sativa45.6941.9894.85233forward
CNT30678616Triticum aestivumSetaria viridis27.4528.6999.29140forward
CNT30522020Triticum aestivumSetaria italica49.6153.3894.86253forward
CNT30639255Triticum aestivumNymphaea colorata18.6326.2483.1695forward
CNT30517240Triticum aestivumJuglans regia18.0430.4682.6192forward
CNT30710396Triticum aestivumGlycine max20.3921.2783.65104forward
CNT30554655Triticum aestivumOryza glaberrima45.6926.6394.85233forward
CNT30440464Triticum aestivumAegilops tauschii62.3538.31100318forward
CNT30247647Triticum aestivumAvena sativa70.9858.7790.06362forward
CNT30665854Triticum aestivumTriticum dicoccoides62.3560.46100318forward
CNT30228866Triticum aestivumAnanas comosus44.7126.0985.09228forward
CNT30344027Triticum aestivumEragrostis tef48.0430.3293.88245forward
CNT30596794Triticum aestivumOryza meridionalis45.6935.1494.42233forward
CNT30370885Triticum aestivumOryza glumipatula45.6933.5794.85233forward
CNT30148662Triticum aestivumBrachypodium distachyon48.4332.0892.31247forward
CNT30577354Triticum aestivumOryza barthii45.6928.3594.85233forward
CNT30579362Triticum aestivumEchinochloa crusgalli48.2428.2194.31246forward
CNT30499040Triticum aestivumDigitaria exilis37.0627.7993.12189forward
CNT30117312Triticum aestivumOryza nivara45.6929.5794.85233forward

Expression of CNT30299532

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

>peptide 2 (61 aa)
MARVAGRGLAEGDQAAVIRWRVAAEACVAMAMAVALQARWFLAREEMGGGAEATRARGRWGC

Sequence

>CNT30299532
TCATCGCCACCCGCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAGATGTCGAAGGAGTTCTTGCCGGTGAACTTGA
CCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTG
GAGGTACTGCACCTCGCCGTTGGGGAAGACGCGGTAGAACTGGTAGGCGATCTTGTACTTGGAGCGGAGGCGGTTGCCGAGGGCGAGGCACTGCTCCTTG
CGGGCGAGCTTGAGGAGGATGGCATGGCGAGGGTGGCGGGGCGGGGCTTGGCGGAGGGCGACCAGGCCGCGGTGATCAGGTGGCGCGTCGCCGCCGAGGC
TTGCGTGGCCATGGCCATGGCGGTGGCGCTCCAAGCTCGGTGGTTCTTGGCGAGAGAGGAGATGGGGGGAGGAGCCGAGGCCACACGCGCGCGCGGGAGA
TGGGGTTGTG