Detailed information on CNT30249161


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 8e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639255Avena sativaNymphaea colorata27.9336.1980.92131forward
CNT30517240Avena sativaJuglans regia19.6230.4683.792forward
CNT30630888Avena sativaVigna unguiculata21.5414.9284.16101forward
CNT30362113Avena sativaSorghum bicolor24.7317.5295.69116forward
CNT30570681Avena sativaVitis vinifera20.266.9586.3295forward

Expression of CNT30249161

Peptides detected in this lncRNA

>peptide 1 (31 aa)
PVNLTSMGLTFFPMLRKFWPTPCLPALTFSG*

>peptide 2 (65 aa)
GELDLDGADVLSDAAEVLAHALPTRVDLLRVDAVLGVEVLHLAVGEDAVELVRDLVLGAEPVAEG*

>peptide 3 (73 aa)
MMAAAQSGAGPRVEGSARETARGLEEGDQTAVMRWRVAAEACVAMAMAEVVLGNGRTGEATRARGRVVPMRWV*

Sequence

>CNT30249161
CCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTTCCGATGCTGCGGAAGTTCTGGCCCACGCCCTGCCTACCCGCGTTGACCTTCTCCGGGTAGACGC
CGTCCTTGGGGTGGAGGTACTGCACCTCGCCGTTGGGGAAGACGCGGTAGAACTGGTACGCGATCTTGTACTTGGAGCGGAGCCTGTTGCCGAGGGCTAG
GCACTGCTCCTTGCGCGCCAGCTTGAGGAGGTTGGGGCCCTCGCGCATGATGGCGGCGGCGCAGAGCGGGGCCGGGCCGCGGGTGGAGGGGAGCGCGAGG
GAGACGGCGCGCGGCTTGGAGGAGGGCGACCAGACCGCGGTGATGAGGTGGCGGGTGGCCGCCGAGGCTTGCGTGGCCATGGCCATGGCGGAGGTGGTTC
TTGGCAACGGGAGGACAGGAGAGGCCACACGCGCGCGCGGGAGAGTGGTGCCGATGCGATGGGTGTGAT