Detailed information on CNT30633568


BLAST search results

BLAST vs Swiss-Prot:
sp|P27493|CB22_TOBAC, E-value = 2e-175

BLAST vs NONCODE:
NONSTUT001352, E-value = 1e-147

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616124Capsicum annuumSesamum indicum70.4357.4189.62655forward
CNT30269327Capsicum annuumChenopodium quinoa55.3858.8685.05515forward
CNT30628736Capsicum annuumVigna unguiculata61.5177.384.27572forward
CNT30202642Capsicum annuumHelianthus annuus35.8159.7886.49333forward
CNT30623366Capsicum annuumDaucus carota69.3561.9686.2645forward
CNT30356707Capsicum annuumLactuca sativa54.343.4288.32505forward
CNT30499258Capsicum annuumDigitaria exilis69.8964.2383.69650forward

Expression of CNT30633568

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MDQTWVAQVVKSTLAEYLGSSLEPHSLTKLDTITGQELGENTSKSTKHSPSAVDHLEFTVLGKGFRVC*

>peptide 2 (67 aa)
MPLDHQQDPMGQSCHQGIVGRLPHQEAHQQYGIPQRLPSRQLGKPRWPRCSVHGPNLGCPSSQVHPR*

>peptide 3 (49 aa)
MEILPFPEISESDGESFTACPAKEGEERAIVAAAMVYKEESEGVTSLICQ

>peptide 4 (43 aa)
EGEGESVTACPAKEGEERAIVEAAMVFLKRKEQSLWRRPMRCC*

>peptide 5 (39 aa)
MRLAWRQSFSWRSFHFQRFLSQMVRASLPVRQKKGKKEP*

Sequence

>CNT30633568
CTGAGGGAGAGGGTGAGAGTGTCACTGCCTGTCCAGCAAAAGAAGGGGAAGAAAGAGCCATTGTAGAAGCTGCCATGGTTTTTCTCAAGAGAAAGGAACA
AAGTTTGTGGCGTAGGCCCATGCGTTGTTGTTAACTGGATCTGCAAGGTGGTCAGCGAGGTTCTCCAATGGACCCTTTCCTGTAACAATGGCCTGAACAA
AGAATCCAAACATAGAGAACATAGCAAGTCTACCGTTCTTGATCTCCTTTACCTTGAGCTCAGCAAATGCCTCTGGATCATCAGCAAGACCCAATGGGTC
AAAGCTGCCACCAGGGTATAGTGGGTCGACTACCTCACCAAGAGGCCCACCAGCAATACGGTATCCCTCAACGGCTCCCATCAAGACAACTTGGCAAGCC
CAGATGGCCAAGATGCTCTGTGCATGGACCAAACTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAATATCTGGGATCCAGCCTTGAACCACACAG
CCTCACCAAACTTGACACCATTACGGGCCAAGAGCTCGGGGAAAACACATCCAAGAGCACCAAGCATAGCCCATCTGCAGTGGATCACCTCGAGTTCACG
GTTCTTGGCAAAGGTTTCAGGGTCTGCTGAAAGTCCAGCGGTATCCCACCCATAGTCACCAGGGAATTCACCAGTCAAGTAGCTTGGGGGCTCACCAGAG
AATGGGCCCAAGTACTTAACACGGTCTGGACCATACCATGGGCTGCTAGATGCGGCTGGCTTGGAGGCAGTCTTTCTCATGGAGATCCTTCCATTTCCAG
AGATTTCTGAGTCAGATGGTGAGAGCTTCACTGCCTGTCCGGCAAAAGAAGGGGAAGAAAGAGCCATAGTAGCAGCTGCCATGGTTTATAAAGAGGAAAG
TGAGGGGGTTACTAGTTTGATATGTCAAAG