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Detailed information on CNT30356707


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 4e-139

BLAST vs NONCODE:
NONMTRT001605, E-value = 4e-86

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709643Lactuca sativaGlycine max31.1337.5986.46362forward
CNT30633568Lactuca sativaCapsicum annuum43.4254.388.32505forward
CNT3091645Lactuca sativaSolanum tuberosum39.9842.7488.82465forward
CNT30508800Lactuca sativaSolanum lycopersicum40.0749.9587.98466forward
CNT30598305Lactuca sativaFraxinus excelsior37.5863.9885.58437forward

Expression of CNT30356707

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MPLGHQPDPMGRSYHQGKVGQLPHQEVQSL*

>peptide 2 (35 aa)
MYYTKLIHKRVPHHSNIISHSNSQNSLSRYKVCSI*

>peptide 3 (43 aa)
MPLGHQPDPMGRSYHQGKVGQLPHQEVHQQFCNLQLHPSRSLG*

>peptide 4 (32 aa)
MASLPFLSSFTFSSANASGSSARPNGSKLPPG*

>peptide 5 (32 aa)
MASLPFLSSFTFSSANASGSSARPNGSKLPPG*

>peptide 6 (78 aa)
MAHLLWMTSSSRYLTRSGPYHGLPDGATFLTAVFLMETLPFPIISEPDGAAFTACPTKEEDRAMVEAAIFVRFILKML*

>peptide 7 (71 aa)
MDQTWVPQVVKTTLTKDLGSSLEPYSLTKLDTITRQEFGEDAPKSSEHGPSAVDDLKLTVLNTVGAVPWTS*

Sequence

>CNT30356707
TTAAAACCTAGTATTAGAAAGGAAAACTAAATTAACACCAATTTGCCCAAAATTAAACCATGTATTATACTAAATTAATTCACAAGAGAGTTCCACATCA
CTCAAATATTATCTCGCACTCAAATTCACAAAACTCACTTTCCAGGTACAAAGTTTGTAGCATATGACCATGCATTGTTTGCAACCGGGTCCGCAAGATG
GTCAGCGAGGTTCTCCAATGGTCCCTTTCCGGTAACAATGGCTTGAACAAAGAATCCAAACATAGAGAACATGGCTAGTCTACCGTTCTTGAGCTCCTTC
ACTTTCAGCTCAGCAAATGCCTCTGGGTCATCAGCCAGACCCAATGGGTCGAAGCTACCACCAGGGTAAAGTGGGTCAACTACCTCACCAAGAGGTACAA
AGTTTGTAGCATATGACCATGCATTGTTTGCAACAGGGTCAGCAAGGTGGTCAGCGAGGTTCTCCAATGGTCCCTTTCCGGTAACAATGGCTTGAACAAA
GAATCCAAACATAGAGAACATGGCTAGTCTACCGTTCTTGAGCTCCTTCACTTTCAGCTCAGCAAATGCCTCTGGGTCATCAGCCAGACCCAATGGGTCG
AAGCTACCACCAGGGTAAAGTGGGTCAACTACCTCACCAAGAGGTCCACCAGCAATTCTGTAACCTTCAACTGCACCCATCAAGATCACTTGGGTAGCCC
AGATGGCTAAAATGCTTTGTGCATGGATCAAACTTGGGTTCCCCAAGTAGTCAAGACCACCCTCACTAAAGATCTGGGATCCAGCCTTGAACCATACAGC
CTCACCAAACTTGACACCATTACGCGCCAAGAGTTCGGGGAAGACGCACCCAAGAGCTCCGAGCATGGCCCATCTGCTGTGGATGACCTCAAGCTCACGG
TACTTAACACGGTCGGGGCCGTACCATGGACTTCCTGATGGTGCGACTTTCTTGACTGCTGTCTTCCTCATGGAAACCCTTCCATTTCCGATTATTTCTG
AACCAGATGGTGCTGCTTTCACTGCCTGTCCGACGAAAGAAGAAGATAGAGCCATGGTGGAAGCTGCCATTTTTGTGAGATTTATTTTGAAGATGTTGTG
ATGGTTATACTTATGAAGATGGGTAGAACTGGAAGTAGATTTATAGGGTAGTTTTTGGATCAG