Detailed information on CNT30630954


BLAST search results

BLAST vs Swiss-Prot:
sp|P27520|CB215_PEA, E-value = 3e-80

BLAST vs NONCODE:
NONSTUT002515, E-value = 5e-53

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500934Vigna unguiculataCoffea canephora29.4610.687.65170forward
CNT3085816Vigna unguiculataVigna radiata94.2885.2792.1544forward
CNT30538907Vigna unguiculataBrassica napus38.8251.7382.14224forward
CNT30234046Vigna unguiculataBrassica oleracea53.3853.282.47308forward
CNT30145752Vigna unguiculataMedicago truncatula18.0230.9593.27104forward
CNT30313266Vigna unguiculataCamelina sativa51.349.1782.09296forward
CNT3040152Vigna unguiculataMarchantia polymorpha52.8630.9682.95305forward

Expression of CNT30630954

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MMESAQRMDPSTWDDALRSTLDGAAHAGATFAGAAGLADELIDLLESSLTSEC*

>peptide 2 (38 aa)
MLIAGKQWWPWLCCVGKGLFFLWFCECVRMLIAGKQWWP

Sequence

>CNT30630954
CCCCATAAGCACAACCTGCACAGCCCAGATGGCAAGAATGCTCTGAGCATGGATTAGGTTTGGGTTCCCCAAATAGTCAAGTCCTCCCTCAGAGAAGATC
TGTGCACCAGCCTTGAACCACACTGCCTCACCGAATTTCACACCGTTCTTCTCAAGAATCTCAGGGAAGGTGCATCCCAGAGCACCAAGCATGGCCCATC
TGCTGTGAATCACCTCCAACTCACGGTTCCTGGCAAAGGTTTCTGGGTCAGCTGATAATCCAGCTGTGTCCCATCCGTAGTCACCGGGGAATTCACCAGT
CAGGTATGATGGAATCTGCTCAGAGAATGGACCCAAGTACTTGGGACGATGCTCTGAGGAGCACTCTTGACGGTGCGGCGCATGCTGGTGCGACCTTTGC
CGGAGCCGCCGGTCTTGCGGACGAACTCATTGACCTGCTTGAGAGCAGTTTGACCAGCGAATGCTGATTGCTGGAAAGCAGTGGTGGCCATGGCTGTGTT
GTGTTGGCAAAGGTCTCTTCTTTCTTTGGTTTTGTGAGTGTGTTAGAATGCTGATTGCTGGAAAGCAGTGGTGGCCA