Detailed information on CNT30538907


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7M1L0|CB23C_PEA, E-value = 7e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630954Brassica napusVigna unguiculata51.7338.8282.14224forward
CNT30171926Brassica napusTrifolium pratense31.6431.0786.86137forward
CNT30410959Brassica napusPapaver somniferum60.7429.5880.99263forward

Expression of CNT30538907

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MLLALPICCGLLRAHGSLRMFLGQRRDQLCPNRSLRGIHQLDLTVRRMTTRPPPLEAPTLRRRSLEGFRAVWPAKEECWIADVAILILTPNRNT

Sequence

>CNT30538907
AGCTAAAATGCTTTGCGCGTGGATCAAGTTAGGGTTTCCGAGGTAATCAAGCCCTCCTTCTGAGAAGATCTGAGAACCTGCCTTGAACCACACGGCTTCA
CCGAACTTGACTCCGTTTTTGGAGAGAATCTCTGGGAAGGTGCAGCCTAATGCTCCTAGCATTGCCCATCTGCTGTGGATTACTTCGAGCTCACGGTTCT
TTGCGAATGTTTCTGGGTCAGCGGAGAGACCAGCTGTGTCCCAACCGTAGTCTCCGGGGTATTCACCAGTTAGACTTGACGGTACGACGCATGACGACGC
GGCCACCGCCGTTGGAAGCTCCTACTTTGCGGAGGAGATCGTTGGAGGGCTTCAGGGCCGTTTGGCCGGCGAAAGAGGAGTGCTGGATTGCTGACGTAGC
CATTCTTATCTTAACTCCAAACAGAAACACAAA