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Detailed information on CNT30145752


BLAST search results

BLAST vs Swiss-Prot:
sp|P12328|CB21_LEMGI, E-value = 5e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526271Medicago truncatulaPhaseolus vulgaris30.3615.3292.16102forward
CNT30630954Medicago truncatulaVigna unguiculata30.9518.0293.27104forward
CNT3085816Medicago truncatulaVigna radiata30.3615.9991.18102forward
CNT30172108Medicago truncatulaTrifolium pratense47.0214.792.41158forward

Expression of CNT30145752

Peptides detected in this lncRNA

>peptide 1 (64 aa)
QIVKATLREDLGTSLKPHSLTEFNTVLLKDLREGTTHGEATLAKATSFPDELISLFQTSLSSEC*

>peptide 2 (48 aa)
MVKRLWPKLPAFLMNSFPCFKPVFPVNADCWIAEVAMRALRFLDVCSL*

Sequence

>CNT30145752
CCCAAATAGTCAAGGCCACCCTCAGAGAAGATCTGGGCACCAGCCTTAAACCACACAGCCTCACCGAATTTAACACCGTTCTTCTCAAGGATCTCAGGGA
AGGTACGACGCATGGTGAAGCGACTTTGGCCAAAGCTACCAGCTTTCCTGATGAACTCATTTCCTTGTTTCAAACCAGTCTTTCCAGTGAATGCTGATTG
TTGGATTGCAGAGGTGGCCATGAGGGCGTTGAGGTTTCTTGATGTTTGTTCTCTTTAGTGGTATAAGCTAGTGTTGTTGTGAAGAATGAAGAAAGGATAC
AAAGGTTTATAGAAGTGTTGGGAGTGGCCACGGTGG